Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SNORA20.3-201ENST00000516880 132 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC008802.1-201ENST00000519121 791 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 CYCSP30-201ENST00000546447 172 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 EIF5A2P1-201ENST00000564027 460 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AP000860.1-201ENST00000605250 559 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC064801.1-201ENST00000612025 407 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC091834.1-201ENST00000614543 472 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC092650.2-201ENST00000619984 902 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC244100.1-202ENST00000621554 382 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AP005264.7-201ENST00000625003 745 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC099654.5-201ENST00000636479 350 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 MTCO1P23-201ENST00000415223 1526 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RPL21P132-201ENST00000331267 462 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RNU6-181P-201ENST00000363225 107 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RNU6-115P-201ENST00000364310 107 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RNU4-76P-201ENST00000364509 141 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 MIR449B-201ENST00000384995 97 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 MTCYBP36-201ENST00000404146 440 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RNU6-248P-201ENST00000410720 107 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC092634.6-201ENST00000418558 192 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RPL21P32-201ENST00000419877 477 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC009237.2-201ENST00000421358 284 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 MTCO2P11-201ENST00000431069 680 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RPS26P40-201ENST00000435209 294 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 MTCO3P18-201ENST00000440206 761 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 USP9YP8-201ENST00000441913 500 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RPL7L1P8-201ENST00000469911 741 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC091951.2-201ENST00000500762 203 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC008628.2-201ENST00000502605 298 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 KLRA1P-201ENST00000503499 986 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 PAICSP4-201ENST00000517543 1253 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AP002748.2-201ENST00000528671 348 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC018552.3-201ENST00000567416 561 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 MIR3913-1-201ENST00000577744 102 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC115085.1-201ENST00000588924 229 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC025449.1-201ENST00000603896 529 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC069304.2-201ENST00000605154 435 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC104458.1-201ENST00000608243 463 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AL354760.1-201ENST00000608357 643 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC091304.9-201ENST00000612091 226 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 MIR7702-201ENST00000621931 59 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AC120349.2-201ENST00000625002 298 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 LINC00561-201ENST00000565815 2738 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 AL356489.2-201ENST00000566968 3528 ntBASIC4.1□□□□□ -1.75
EBF3Q9H4W6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.1□□□□□ -1.75
EBF3Q9H4W6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.75
EBF3Q9H4W6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 AL592437.2-201ENST00000421655 2434 ntBASIC4.09□□□□□ -1.75
EBF3Q9H4W6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
EBF3Q9H4W6 MIR208A-201ENST00000362287 71 ntBASIC4.09□□□□□ -1.75
EBF3Q9H4W6 Y_RNA.38-201ENST00000362617 102 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms