Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MTCYBP24-201ENST00000420387 1106 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 MTCO2P1-201ENST00000424648 477 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RPP40P1-201ENST00000426762 456 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RPL21P2-201ENST00000440049 481 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL158053.1-201ENST00000441503 453 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RN7SL297P-201ENST00000483161 293 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 NCOR1P1-202ENST00000486162 291 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC008628.1-201ENST00000508663 265 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 BPTFP1-201ENST00000579209 492 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC022069.1-201ENST00000582910 658 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 U73479.1-201ENST00000618062 168 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL590396.4-201ENST00000636779 956 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 RNA5SP189-201ENST00000364920 115 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 U8.9-201ENST00000365667 134 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 EIF5P1-201ENST00000400019 1231 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 SSXP10-201ENST00000402595 565 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 RNU2-72P-201ENST00000411175 163 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 OR51A3P-201ENST00000413596 924 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 HSPE1P28-201ENST00000443139 211 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 AC093392.2-201ENST00000450682 337 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 HMGN3P1-201ENST00000453847 193 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 MTCO2P9-201ENST00000503214 694 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 OR8K4P-201ENST00000534608 872 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 AC092470.1-201ENST00000546187 132 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 NIFKP8-201ENST00000560500 874 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 SNRPGP15-201ENST00000600149 222 ntBASIC3.37□□□□□ -1.87
RPAP1Q9BWH6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 MIR26A1-201ENST00000362205 77 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 Y_RNA.110-201ENST00000363220 99 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 RNU6-932P-201ENST00000391108 106 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 MRPL50P2-201ENST00000416821 482 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC114973.1-201ENST00000429057 632 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 YWHAZP7-201ENST00000436906 631 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 RPL7P36-201ENST00000444633 681 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC017099.1-201ENST00000448261 1028 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 OR51B8P-201ENST00000449892 769 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 GSTA11P-201ENST00000452866 669 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 RPS3P1-201ENST00000456781 192 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 NAP1L1P3-201ENST00000462291 880 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC126389.1-201ENST00000477436 290 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 RNU4-29P-201ENST00000515943 174 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 RNU6-334P-201ENST00000517072 102 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 HPRT1P3-201ENST00000539521 576 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC091544.4-201ENST00000555268 342 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 MIR4789-201ENST00000577469 82 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC092474.3-201ENST00000603022 568 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AL035413.2-201ENST00000604801 525 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AC073348.1-201ENST00000623002 331 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 AL049780.3-201ENST00000624612 1583 ntBASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RPAP1Q9BWH6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 MTND5P31-201ENST00000419366 1374 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 ZNF37BP-203ENST00000452306 1352 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC092593.1-201ENST00000515413 1815 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 RPL9P7-201ENST00000330965 580 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 RNU1-112P-201ENST00000364401 164 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 EI24P1-201ENST00000416584 867 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 OFD1P18Y-201ENST00000420889 959 ntBASIC3.35□□□□□ -1.87
RPAP1Q9BWH6 AC009237.2-201ENST00000421358 284 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms