Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 SNORA32.2-201ENST00000384049 122 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 RNU6-510P-201ENST00000391239 108 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 RPL35AP12-201ENST00000425362 338 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 SRIP2-201ENST00000428470 166 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 KCTD9P3-201ENST00000434597 1169 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 TXNP1-201ENST00000441872 371 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 PRDX3P3-201ENST00000447765 522 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC009127.1-201ENST00000467090 155 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC097484.1-201ENST00000471148 389 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 RPL39P36-201ENST00000490784 156 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 RPS23P1-201ENST00000491662 432 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC023424.1-201ENST00000496058 459 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 HMGN1P12-201ENST00000499125 195 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 MTCO2P30-201ENST00000503662 364 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 RNU6-875P-201ENST00000516488 106 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 RN7SKP66-201ENST00000516681 231 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC006270.2-201ENST00000578523 652 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC009597.2-201ENST00000604659 592 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 MTND5P42-201ENST00000637720 498 ntBASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAIPQ9BWF2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AL078599.1-201ENST00000402075 293 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AL592114.1-201ENST00000403842 483 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 MIR1182-201ENST00000408363 97 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 RNA5SP345-201ENST00000410646 108 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 RN7SKP126-201ENST00000411143 300 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AL590762.4-201ENST00000425885 253 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 KNOP1P3-201ENST00000446933 426 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 MTND1P11-201ENST00000456661 876 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 RPL7P19-201ENST00000469948 618 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC091951.2-201ENST00000500762 203 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 RNU6-927P-201ENST00000516199 100 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 RNU6-685P-201ENST00000517088 95 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AP001804.3-201ENST00000525146 880 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 ATP5F1P5-201ENST00000526403 760 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC078814.3-201ENST00000553036 491 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 RNU6-89P-201ENST00000606519 100 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC244107.2-201ENST00000611773 76 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC104985.2-201ENST00000620598 500 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AL357559.1-201ENST00000622228 274 ntBASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAIPQ9BWF2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 Y_RNA.100-201ENST00000363141 102 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 MIR105-1-201ENST00000385222 81 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 CISD1P1-201ENST00000393907 327 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 PPIAP9-201ENST00000403866 498 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 BTF3L4P3-201ENST00000418879 476 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC093162.1-201ENST00000419682 124 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 DDX39BP1-205ENST00000422507 192 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC104058.1-201ENST00000448028 297 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 ELOCP23-201ENST00000452014 332 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms