Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC044792.1-201ENST00000593294 196 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 VN1R79P-201ENST00000593540 513 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AL606490.9-201ENST00000603331 271 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC064836.2-201ENST00000609491 462 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC104010.1-201ENST00000616889 150 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 uc_338.13-201ENST00000618243 179 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC015967.1-201ENST00000619893 476 ntBASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
LRFN3Q9BTN0 AC092125.1-201ENST00000562568 1995 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 MIR331-201ENST00000362302 94 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 MT-TL1-201ENST00000386347 75 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 RNU6-1009P-201ENST00000390996 107 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 ARL4AP5-201ENST00000404372 599 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 RPS3AP3-201ENST00000411933 242 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 NOTCH2P1-201ENST00000443481 624 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 PRDX3P3-201ENST00000447765 522 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 DPPA3P1-201ENST00000448050 469 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 snoU13.3-201ENST00000459441 104 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 RPL35P6-201ENST00000490024 372 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 RPS4XP18-201ENST00000495480 763 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC108145.1-201ENST00000503770 153 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC026403.1-201ENST00000518938 295 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 OR5M7P-201ENST00000526140 972 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 OR5AL2P-201ENST00000532185 920 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 RPL21P5-201ENST00000554662 472 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC009977.1-201ENST00000586015 570 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 RNU6-87P-201ENST00000607561 108 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 AC011460.1-201ENST00000636268 1834 ntBASIC4.56□□□□□ -1.68
LRFN3Q9BTN0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 FARSBP1-201ENST00000435808 1778 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 CASC19-280ENST00000642102 1351 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC233263.6-201ENST00000631132 1963 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 RNA5SP432-201ENST00000362480 116 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 RNY4P14-201ENST00000363656 96 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 MIR124-3-201ENST00000384866 87 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 MRPL42P2-201ENST00000403169 426 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 RPS12P23-201ENST00000419579 400 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC114495.1-201ENST00000441274 436 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 SNORD121B-201ENST00000458838 81 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AP001486.1-201ENST00000463339 476 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 MTCYBP18-201ENST00000501056 747 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 NDUFB4P2-201ENST00000509515 391 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 RNU6-709P-201ENST00000517257 104 ntBASIC4.55□□□□□ -1.68
LRFN3Q9BTN0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms