Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RPS6P4-201ENST00000494693 758 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 MTCO1P47-201ENST00000523889 1271 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 MTND4LP18-201ENST00000526864 291 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 GNRHR2P1-201ENST00000555315 631 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC025884.1-201ENST00000556034 378 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC105224.1-201ENST00000587055 421 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC068790.3-201ENST00000602988 553 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AL109653.1-201ENST00000603091 248 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AP000403.1-201ENST00000603349 851 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC103710.3-201ENST00000608157 948 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC128687.2-201ENST00000609657 566 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 MIR4727-201ENST00000622232 55 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC097655.1-201ENST00000635075 318 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 RNU6-223P-201ENST00000362830 107 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 Y_RNA.97-201ENST00000363094 102 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 MIR1290-201ENST00000408735 78 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC109583.1-201ENST00000432156 268 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC096638.2-201ENST00000434965 711 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 SKP1P1-201ENST00000438081 489 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 SETD6P1-201ENST00000444575 317 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 MTCO1P42-201ENST00000457379 726 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 RPL29P14-201ENST00000495837 428 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC118465.1-201ENST00000513820 1271 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 SNORA70.16-201ENST00000516390 95 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 RN7SKP21-201ENST00000516503 220 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 RNU6-840P-201ENST00000517275 65 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 FAM60DP-201ENST00000524174 632 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AP000907.2-201ENST00000530827 353 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC007224.1-201ENST00000564410 144 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AL360157.1-201ENST00000565962 87 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC008088.1-201ENST00000580993 280 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 WISP1-OT1-201ENST00000602893 642 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC068831.8-201ENST00000620171 435 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC068724.3-201ENST00000625906 87 ntBASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HERPUD2Q9BSE4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.15□□□□□ -1.74
HERPUD2Q9BSE4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.15□□□□□ -1.74
HERPUD2Q9BSE4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HERPUD2Q9BSE4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HERPUD2Q9BSE4 PABPC1P9-201ENST00000426076 1612 ntBASIC4.15□□□□□ -1.74
HERPUD2Q9BSE4 AL121657.1-201ENST00000327215 531 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 RNA5SP399-201ENST00000364003 117 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 HSPE1P12-201ENST00000412576 301 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC108032.1-201ENST00000416706 207 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 LARP1BP3-201ENST00000437229 869 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AL445567.1-201ENST00000439121 144 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 TPT1P14-201ENST00000448018 505 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 FABP3P2-201ENST00000453169 399 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 RPS7P7-201ENST00000463499 571 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AL049714.1-201ENST00000466686 347 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 HSPE1P6-201ENST00000479457 291 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 RN7SL604P-201ENST00000492589 296 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms