Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RPL23AP62-201ENST00000463396 453 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 RPL9P32-201ENST00000464118 620 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AC068587.2-201ENST00000478386 781 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 MTND2P14-201ENST00000482139 351 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AC096576.1-201ENST00000489014 359 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.55□□□□□ -1.84
CDCA3Q99618 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.55□□□□□ -1.84
CDCA3Q99618 AC021678.1-201ENST00000505195 936 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 XKRY-201ENST00000510392 1100 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 RNU4-60P-201ENST00000517239 135 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.55□□□□□ -1.84
CDCA3Q99618 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.55□□□□□ -1.84
CDCA3Q99618 ZNF321P-202ENST00000550843 495 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 MTND3P12-201ENST00000559068 328 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AP005205.1-201ENST00000563503 508 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AL133457.1-201ENST00000564251 987 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.55□□□□□ -1.84
CDCA3Q99618 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.55□□□□□ -1.84
CDCA3Q99618 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.55□□□□□ -1.84
CDCA3Q99618 VN1R82P-201ENST00000601481 356 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AC103881.1-201ENST00000603476 538 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AL031281.1-201ENST00000604049 488 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AC243773.3-201ENST00000613270 256 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AC009318.4-201ENST00000620496 486 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 AC231657.1-201ENST00000624313 397 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.55□□□□□ -1.84
CDCA3Q99618 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDCA3Q99618 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDCA3Q99618 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDCA3Q99618 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDCA3Q99618 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDCA3Q99618 MTCO1P24-201ENST00000515438 1558 ntBASIC3.55□□□□□ -1.84
CDCA3Q99618 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDCA3Q99618 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDCA3Q99618 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDCA3Q99618 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDCA3Q99618 RNA5SP42-201ENST00000364278 115 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 MTND4LP20-201ENST00000402379 270 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 HSPE1P8-201ENST00000406997 288 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AL158071.1-201ENST00000430315 461 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 MTND1P31-201ENST00000449206 961 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AC098826.2-201ENST00000452011 651 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 TRGVB-201ENST00000453257 471 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.54□□□□□ -1.84
CDCA3Q99618 SNORD108-201ENST00000459332 71 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.54□□□□□ -1.84
CDCA3Q99618 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.54□□□□□ -1.84
CDCA3Q99618 TMEM248P1-201ENST00000510579 951 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.54□□□□□ -1.84
CDCA3Q99618 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.54□□□□□ -1.84
CDCA3Q99618 RNU6-1231P-201ENST00000517185 103 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.54□□□□□ -1.84
CDCA3Q99618 AL139174.1-201ENST00000531489 886 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AP002404.1-201ENST00000532005 451 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.54□□□□□ -1.84
CDCA3Q99618 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.54□□□□□ -1.84
CDCA3Q99618 DUXAP6-201ENST00000553858 601 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.54□□□□□ -1.84
CDCA3Q99618 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDCA3Q99618 MIR5047-201ENST00000579212 100 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.54□□□□□ -1.84
CDCA3Q99618 AC006539.2-201ENST00000601729 572 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AL592221.1-201ENST00000605266 382 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.54□□□□□ -1.84
CDCA3Q99618 AC026422.1-201ENST00000623961 452 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AC007490.1-201ENST00000624321 703 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 AC017037.3-201ENST00000625016 472 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 CYP3A51P-201ENST00000633513 256 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDCA3Q99618 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.54□□□□□ -1.84
CDCA3Q99618 AC004944.1-201ENST00000517807 3059 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDCA3Q99618 AL390862.1-201ENST00000635467 1469 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.54□□□□□ -1.84
CDCA3Q99618 MTND5P24-201ENST00000438892 1767 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 ZNF542P-204ENST00000482727 1305 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.53□□□□□ -1.84
CDCA3Q99618 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDCA3Q99618 RNU6-730P-201ENST00000383954 104 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 RSL24D1P4-201ENST00000400938 484 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 MIR1284-201ENST00000408337 120 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 AC007899.1-201ENST00000412776 775 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDCA3Q99618 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.53□□□□□ -1.84
CDCA3Q99618 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
CDCA3Q99618 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.53□□□□□ -1.84
CDCA3Q99618 AC140076.1-201ENST00000449897 361 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 AC069499.1-201ENST00000489433 509 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 AC012170.1-201ENST00000495139 359 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 AC093281.2-201ENST00000510153 597 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.53□□□□□ -1.84
CDCA3Q99618 AC104986.1-201ENST00000517978 436 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 AP003461.1-201ENST00000528866 78 ntBASIC3.53□□□□□ -1.84
CDCA3Q99618 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CDCA3Q99618 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CDCA3Q99618 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.53□□□□□ -1.84
CDCA3Q99618 OR6C73P-201ENST00000546432 358 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms