Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL355810.1-201ENST00000614629 552 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 AC095031.1-201ENST00000623685 672 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.7□□□□□ -1.98
VAT1Q99536 AC090897.3-201ENST00000636973 1157 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VAT1Q99536 ZNF833P-201ENST00000424938 1494 ntBASIC2.7□□□□□ -1.98
VAT1Q99536 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.7□□□□□ -1.98
VAT1Q99536 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
VAT1Q99536 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAT1Q99536 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAT1Q99536 GNG5P1-201ENST00000255500 204 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 RNU6-821P-201ENST00000390995 107 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.69□□□□□ -1.98
VAT1Q99536 AL035410.1-201ENST00000427409 427 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC109583.1-201ENST00000432156 268 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 RPL23AP74-201ENST00000437246 471 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.69□□□□□ -1.98
VAT1Q99536 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.69□□□□□ -1.98
VAT1Q99536 AC004022.1-201ENST00000447766 1066 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VAT1Q99536 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 AL590639.1-201ENST00000456484 337 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC025181.1-201ENST00000477507 416 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 GAPDHP39-201ENST00000481866 979 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC096751.1-202ENST00000502691 1067 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC097462.2-201ENST00000504623 481 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.69□□□□□ -1.98
VAT1Q99536 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VAT1Q99536 SETP12-201ENST00000514068 805 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 AC022690.1-201ENST00000526681 550 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC104229.1-201ENST00000561364 255 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.69□□□□□ -1.98
VAT1Q99536 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.69□□□□□ -1.98
VAT1Q99536 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 AC008962.1-201ENST00000605729 304 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AL360181.4-201ENST00000621752 134 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 AL137790.1-201ENST00000634283 177 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VAT1Q99536 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 Z82195.2-201ENST00000612348 18351 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.69□□□□□ -1.98
VAT1Q99536 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
VAT1Q99536 AC244517.1-201ENST00000606030 2086 ntBASIC2.69□□□□□ -1.98
VAT1Q99536 AC130650.2-201ENST00000618736 2403 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 SNORD56.4-201ENST00000363883 71 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 RNU6-712P-201ENST00000410558 100 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.68□□□□□ -1.98
VAT1Q99536 AL592148.1-201ENST00000413568 445 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 AC079780.1-201ENST00000428259 207 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.68□□□□□ -1.98
VAT1Q99536 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.68□□□□□ -1.98
VAT1Q99536 AC011816.1-201ENST00000441346 546 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VAT1Q99536 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.68□□□□□ -1.98
VAT1Q99536 AL445669.2-201ENST00000454425 421 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.68□□□□□ -1.98
VAT1Q99536 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.68□□□□□ -1.98
VAT1Q99536 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.68□□□□□ -1.98
VAT1Q99536 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.68□□□□□ -1.98
VAT1Q99536 AC026412.2-201ENST00000512270 1075 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 AC100870.1-201ENST00000522035 505 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.68□□□□□ -1.98
VAT1Q99536 AC126177.3-201ENST00000551839 688 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.68□□□□□ -1.98
VAT1Q99536 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.68□□□□□ -1.98
VAT1Q99536 AC245100.7-201ENST00000609678 442 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.68□□□□□ -1.98
VAT1Q99536 AC006213.5-201ENST00000619673 288 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.68□□□□□ -1.98
VAT1Q99536 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.68□□□□□ -1.98
VAT1Q99536 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VAT1Q99536 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VAT1Q99536 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VAT1Q99536 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VAT1Q99536 SGO1P2-201ENST00000429458 1589 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.67□□□□□ -1.98
VAT1Q99536 RPLP0P7-201ENST00000416050 667 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.67□□□□□ -1.98
VAT1Q99536 MTATP6P4-201ENST00000427725 675 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 UBE2V1P6-201ENST00000430840 422 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 RPL36AP6-201ENST00000435770 321 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.67□□□□□ -1.98
VAT1Q99536 AC015908.1-201ENST00000478739 476 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 ARL4AP2-201ENST00000507378 601 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 KLHL2P1-201ENST00000508691 521 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 AC096725.1-201ENST00000514266 313 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 SNORA31.8-201ENST00000516327 108 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.67□□□□□ -1.98
VAT1Q99536 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.67□□□□□ -1.98
VAT1Q99536 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms