Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC114546.3-201ENST00000623582 1734 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU1-94P-201ENST00000362627 173 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-223P-201ENST00000362830 107 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-1309P-201ENST00000363305 108 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.128-201ENST00000363391 112 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-1318P-201ENST00000365389 103 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 MIR568-201ENST00000385036 95 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-308P-201ENST00000390957 107 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-1158P-201ENST00000391167 107 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU2-62P-201ENST00000410868 191 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 MRPL50P2-201ENST00000416821 482 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL7AP25-201ENST00000423357 805 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 Z74021.1-201ENST00000423610 407 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 BNIP3P2-201ENST00000441221 577 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 TDGF1P1-201ENST00000445734 527 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC012671.1-201ENST00000451912 203 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 NDUFA5P7-201ENST00000452914 242 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC083798.1-201ENST00000472671 131 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC027575.1-201ENST00000481064 460 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AL163540.1-201ENST00000485382 386 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC013356.1-201ENST00000489027 564 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 RPS15AP36-201ENST00000492022 382 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC023194.1-201ENST00000493084 308 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC106872.2-201ENST00000494303 480 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC093840.1-201ENST00000511599 336 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC006499.2-201ENST00000513470 337 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.711-201ENST00000516993 102 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 COX6CP5-201ENST00000527162 228 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 MIR4277-201ENST00000578298 84 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC115621.1-201ENST00000604653 858 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC103710.3-201ENST00000608157 948 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC234782.5-201ENST00000617723 324 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AL133216.2-202ENST00000634512 349 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 MTND4LP32-201ENST00000636111 270 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC022893.2-201ENST00000564832 3296 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AL592437.2-201ENST00000421655 2434 ntBASIC4.7□□□□□ -1.66
CDK5RAP1Q96SZ6 AC139713.2-214ENST00000642059 1811 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 OR5P1P-201ENST00000299512 925 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 IGKV7-3-201ENST00000357453 298 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-666P-201ENST00000363499 107 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-784P-201ENST00000384330 106 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-331P-201ENST00000384724 107 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RPS4XP8-201ENST00000402039 771 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL5P18-201ENST00000406671 891 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU2-9P-201ENST00000410194 145 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 VDAC1P9-201ENST00000412766 841 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 USP9YP16-201ENST00000430287 407 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AL132765.1-201ENST00000434165 553 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 HMGB1P18-201ENST00000438801 619 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC092809.1-201ENST00000441469 474 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL23AP43-201ENST00000446445 471 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 USP9YP23-201ENST00000455085 407 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL23AP24-201ENST00000458203 385 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.631-201ENST00000459607 101 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC097493.1-201ENST00000463958 372 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL23AP65-201ENST00000475608 468 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 OR5BN1P-201ENST00000532955 829 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 POLR2KP1-201ENST00000553226 168 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 MIR4742-201ENST00000581069 85 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 MIR4503-201ENST00000582187 83 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 SS18L2P2-201ENST00000583960 235 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 AP001521.1-201ENST00000609150 300 ntBASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 DDX18P4-201ENST00000511690 1966 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms