Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RNU1-40P-201ENST00000516816 164 ntBASIC1.67□□□□□ -2.14
GAFA1Q96PS6 RNU1-97P-201ENST00000516872 164 ntBASIC1.67□□□□□ -2.14
GAFA1Q96PS6 RNU6-711P-201ENST00000517255 106 ntBASIC1.67□□□□□ -2.14
GAFA1Q96PS6 RN7SL371P-201ENST00000578099 267 ntBASIC1.67□□□□□ -2.14
GAFA1Q96PS6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.67□□□□□ -2.14
GAFA1Q96PS6 AC002984.1-201ENST00000591692 448 ntBASIC1.67□□□□□ -2.14
GAFA1Q96PS6 AC233263.6-201ENST00000631132 1963 ntBASIC1.67□□□□□ -2.14
GAFA1Q96PS6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 RNU6-600P-201ENST00000362524 99 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 SNORD56.5-201ENST00000364281 72 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 MIR144-201ENST00000384886 86 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 MIR153-1-201ENST00000384914 90 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AL137014.1-201ENST00000420490 1226 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC241520.1-201ENST00000422654 1099 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 PTP4A1P3-201ENST00000433661 420 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 CBWD4P-201ENST00000445695 655 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 HSPE1P18-201ENST00000517602 280 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 OR4R1P-201ENST00000529879 463 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AP005205.1-201ENST00000563503 508 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 MTND2P13-201ENST00000577438 1039 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 MIR5089-201ENST00000580047 84 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.66□□□□□ -2.14
GAFA1Q96PS6 RPL23AP78-201ENST00000599928 470 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC113368.1-201ENST00000603736 382 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC092954.1-201ENST00000609121 445 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 AC110994.2-201ENST00000635481 492 ntBASIC1.66□□□□□ -2.14
GAFA1Q96PS6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
GAFA1Q96PS6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
GAFA1Q96PS6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
GAFA1Q96PS6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 RNA5SP88-201ENST00000365560 109 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AC240504.1-201ENST00000395709 845 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AL079342.1-201ENST00000401460 267 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 FO393413.1-201ENST00000402892 195 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AC004866.2-201ENST00000438285 481 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 HSFY3P-201ENST00000444242 1191 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 OR7L1P-201ENST00000456181 380 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 RPL23AP55-201ENST00000498163 452 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 RPL38P4-201ENST00000502376 214 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 IGKV2-36-201ENST00000519999 223 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AL049779.4-201ENST00000604500 156 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AP001521.1-201ENST00000609150 300 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 YWHAEP7-203ENST00000622054 312 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 ZNF355P-201ENST00000427301 3216 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 AC073055.1-201ENST00000456901 1621 ntBASIC1.65□□□□□ -2.15
GAFA1Q96PS6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
GAFA1Q96PS6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 RNU4-7P-201ENST00000364758 141 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 RNU4-26P-201ENST00000410270 107 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC048351.1-201ENST00000420064 602 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AL031659.1-201ENST00000447075 539 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC021205.1-201ENST00000468797 348 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 OR52A4P-203ENST00000498233 1014 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC092436.1-201ENST00000506450 503 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 MTCYBP37-201ENST00000510642 1133 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC104115.2-201ENST00000523026 687 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 FAM92A1P1-201ENST00000528023 890 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC135628.1-201ENST00000568867 534 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 RPS3AP23-202ENST00000574601 686 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 MIR3945-201ENST00000581853 98 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 SNORD84-203ENST00000584275 78 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 SNRPGP19-201ENST00000603826 189 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC112503.1-201ENST00000608436 391 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 AC034102.8-201ENST00000615146 484 ntBASIC1.64□□□□□ -2.15
GAFA1Q96PS6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.64□□□□□ -2.15
GAFA1Q96PS6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms