Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 OFD1P3Y-201ENST00000453312 783 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 BX510359.1-201ENST00000456973 237 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 RPS15AP17-201ENST00000470598 390 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC114967.1-201ENST00000504890 259 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 MTCYBP16-201ENST00000509187 1129 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 ERHP1-201ENST00000523006 310 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 OR5AK1P-201ENST00000524837 922 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AP003102.1-201ENST00000525638 661 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC118942.1-201ENST00000529674 1035 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 SETP7-201ENST00000552169 453 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC069545.1-201ENST00000605671 358 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC009464.1-201ENST00000615731 469 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC004009.2-201ENST00000623016 728 ntBASIC3.62□□□□□ -1.83
CCDC43Q96MW1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC43Q96MW1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 SNORD56.3-201ENST00000363507 71 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 RNU6-173P-201ENST00000364215 104 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 RPL21P32-201ENST00000419877 477 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AL049610.1-201ENST00000423374 372 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC019178.2-201ENST00000423595 505 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 MTND2P5-201ENST00000432656 1006 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 HMGB3P11-201ENST00000440127 604 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 RPS3AP12-201ENST00000443616 753 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC026410.2-201ENST00000460281 156 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC109925.1-201ENST00000478069 331 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC112206.4-201ENST00000515142 405 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 RN7SKP31-201ENST00000516354 278 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC068657.1-201ENST00000520807 306 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC104985.3-201ENST00000623479 597 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC010872.1-201ENST00000624225 675 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AL138960.2-201ENST00000625145 535 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC106858.1-201ENST00000637497 429 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 MIR1322-201ENST00000638013 71 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AC073346.2-201ENST00000624724 2058 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 AP002907.1-201ENST00000606361 1430 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 OR4G11P-202ENST00000642116 1414 ntBASIC3.61□□□□□ -1.83
CCDC43Q96MW1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AL136372.1-201ENST00000403060 228 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 HMGB3P23-201ENST00000414981 585 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 MRPS36P1-201ENST00000421291 307 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AL590233.1-201ENST00000430017 456 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 SNRPEP4-201ENST00000435815 279 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 RPL23AP22-201ENST00000437556 453 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 FTH1P1-201ENST00000437933 532 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC004866.2-201ENST00000438285 481 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 SUMO2P2-201ENST00000456482 255 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 RNA5SP310-201ENST00000459084 116 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 snoU13.22-201ENST00000459428 104 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AP001992.1-205ENST00000462248 379 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 RPL23AP44-201ENST00000482216 473 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 RNU6-276P-201ENST00000516114 96 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 RNU6-1225P-201ENST00000516336 65 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 SNORA70.24-201ENST00000517233 118 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AP001804.3-201ENST00000525146 880 ntBASIC3.6□□□□□ -1.83
CCDC43Q96MW1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC43Q96MW1 CR383656.7-201ENST00000548164 174 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms