Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRIM11Q96F44 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 DHX40P1-201ENST00000588725 1412 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM11Q96F44 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM11Q96F44 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM11Q96F44 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 MTND5P6-201ENST00000422338 1798 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 AC023421.1-201ENST00000590535 1785 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 RNU6-1159P-201ENST00000362933 107 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 RNY3P13-201ENST00000365542 102 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 Y_RNA.376-201ENST00000365638 108 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 HSPA8P15-201ENST00000401676 786 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 AL078604.1-201ENST00000404609 466 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 RPL36AP36-201ENST00000418616 301 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 AC010881.1-201ENST00000433830 235 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 RPS11P7-201ENST00000442125 465 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 AL162388.1-201ENST00000450912 352 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 AL353752.1-201ENST00000454946 260 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 AC079804.1-201ENST00000461922 436 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 SIAH1P1-201ENST00000479411 923 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM11Q96F44 AC009901.1-201ENST00000506703 541 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 RNU6-513P-201ENST00000516104 104 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 snoU109.6-201ENST00000516831 118 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 Y_RNA.715-201ENST00000517082 110 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 AP004607.2-201ENST00000533949 322 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 SETP7-201ENST00000552169 453 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 MIR1273E-201ENST00000581165 102 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 AC017100.2-201ENST00000584628 355 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 MTND4LP5-201ENST00000605152 292 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 AP001486.3-201ENST00000615334 372 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 CDRT1-208ENST00000630868 794 ntBASIC5.66□□□□□ -1.5
TRIM11Q96F44 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM11Q96F44 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM11Q96F44 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM11Q96F44 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
TRIM11Q96F44 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM11Q96F44 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC112198.2-201ENST00000426589 6996 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM11Q96F44 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM11Q96F44 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM11Q96F44 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM11Q96F44 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM11Q96F44 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 RNU6-641P-201ENST00000384006 107 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 Y_RNA.462-201ENST00000384268 102 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 RNU6-886P-201ENST00000384319 105 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 Y_RNA.518-201ENST00000384552 113 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 MIR621-201ENST00000384919 96 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 EIF5P1-201ENST00000400019 1231 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 RN7SKP235-201ENST00000410662 305 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AL359265.2-201ENST00000434367 631 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC099799.1-201ENST00000439809 192 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 RPL21P133-201ENST00000443666 476 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC013470.1-201ENST00000453438 462 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC011225.1-201ENST00000457751 369 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AP000942.1-201ENST00000463969 747 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 RNU6-488P-201ENST00000515918 99 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 RNU6-189P-201ENST00000516120 101 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 RNU7-51P-201ENST00000516560 62 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 RNU1-54P-201ENST00000517181 120 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 RN7SKP92-201ENST00000517266 244 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC112191.2-201ENST00000522428 333 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC027369.5-201ENST00000533838 755 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 HSPE1P20-201ENST00000538133 289 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC040958.1-201ENST00000561102 201 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms