Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 C1DP4-201ENST00000455429 424 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AL583843.1-201ENST00000456070 346 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC091564.1-201ENST00000464563 479 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 RN7SL691P-201ENST00000494487 301 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC103851.1-201ENST00000506833 274 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC093809.1-201ENST00000509155 340 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 PARP4P3-201ENST00000510265 317 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 ZNF705CP-201ENST00000530515 889 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC008638.3-201ENST00000603341 463 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC113403.1-201ENST00000604910 193 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 RMST_7.1-201ENST00000621935 268 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 AL078596.1-201ENST00000624856 447 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 TPTEP1-208ENST00000636884 213 ntBASIC4.57□□□□□ -1.68
CHFRQ96EP1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHFRQ96EP1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CHFRQ96EP1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHFRQ96EP1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC139713.2-215ENST00000641428 5037 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 FARSBP1-201ENST00000435808 1778 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 RNU6-359P-201ENST00000365466 108 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 Y_RNA.474-201ENST00000384341 102 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL590290.1-201ENST00000405336 380 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 Y_RNA.605-201ENST00000410577 105 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 HMGB1P11-201ENST00000413899 637 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 MTCO2P5-201ENST00000422621 426 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 EIF1P3-201ENST00000423841 334 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 RPL23AP52-201ENST00000439311 478 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 MRPL48P1-201ENST00000445390 636 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 TDGF1P1-201ENST00000445734 527 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC104651.2-201ENST00000447549 528 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 RPS27AP17-201ENST00000463344 455 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC091153.1-201ENST00000466297 402 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC073522.1-201ENST00000483312 377 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 RPS15AP36-201ENST00000492022 382 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC108064.1-201ENST00000513791 460 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 RN7SKP82-201ENST00000516786 223 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 RNU7-30P-201ENST00000516835 62 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AP003034.1-201ENST00000534621 422 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 MIR4503-201ENST00000582187 83 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC115085.1-201ENST00000588924 229 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL512605.2-201ENST00000592972 256 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC007621.1-201ENST00000604544 437 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL133215.3-201ENST00000609801 448 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 STMN1P1-201ENST00000617809 440 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC090971.5-201ENST00000621102 293 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 AC110994.2-201ENST00000635481 492 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 DHX9P1-201ENST00000436565 3076 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.56□□□□□ -1.68
CHFRQ96EP1 AL133412.1-201ENST00000380194 2992 ntBASIC4.56□□□□□ -1.68
CHFRQ96EP1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHFRQ96EP1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CHFRQ96EP1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms