Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 AC091925.2-201ENST00000625059 256 ntBASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 MTCO1P12-201ENST00000414273 1543 ntBASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 AC092125.1-201ENST00000562568 1995 ntBASIC4.44□□□□□ -1.7
TRIM43Q96BQ3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 SNORA60-201ENST00000362396 134 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 SNORD3H-201ENST00000384486 214 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 RNU6-297P-201ENST00000384636 107 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 MIR1179-201ENST00000408703 91 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 RNU2-66P-201ENST00000410650 161 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AF274854.1-201ENST00000413236 615 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 RPS3AP44-201ENST00000425466 790 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 OR2AH1P-201ENST00000425717 928 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AL358472.1-201ENST00000431295 329 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AP1S2P1-201ENST00000457344 379 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC011825.1-201ENST00000484967 388 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC006390.1-201ENST00000508068 283 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 NDUFB4P2-201ENST00000509515 391 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 OR4R3P-201ENST00000525084 838 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 OR4P1P-201ENST00000530808 1136 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 EEF1B2P4-201ENST00000551398 348 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 RPL21P12-201ENST00000559810 515 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC009977.1-201ENST00000586015 570 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AL669831.4-202ENST00000590817 238 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC004853.1-201ENST00000604902 698 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 MIR7975-201ENST00000619350 68 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC015871.5-202ENST00000623252 701 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 NMD3P1-201ENST00000439704 1488 ntBASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM43Q96BQ3 MTND5P1-201ENST00000445440 1375 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 Y_RNA.3-201ENST00000362331 103 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 SNORD51-201ENST00000384320 80 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 RNU6-1215P-201ENST00000384441 102 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 SNORD115.1-201ENST00000391109 76 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 RPS20P2-201ENST00000402520 389 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 FCF1P10-201ENST00000407590 479 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 RNA5SP56-201ENST00000410277 118 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AL359704.1-201ENST00000411586 781 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 RPS3AP3-201ENST00000411933 242 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 HMGB3P23-201ENST00000414981 585 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC127526.1-201ENST00000417526 366 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC010975.2-201ENST00000427781 588 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 BX890604.2-201ENST00000427883 474 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 USP9YP28-201ENST00000435142 589 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC108734.1-201ENST00000439549 399 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC098824.1-201ENST00000453565 980 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 PTGES3P3-201ENST00000511479 482 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM43Q96BQ3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms