Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 OR7K1P-201ENST00000546439 926 ntBASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC037471.2-201ENST00000564941 598 ntBASIC3.34□□□□□ -1.87
PTP4A1Q93096 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC015726.1-201ENST00000602353 681 ntBASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC009268.2-201ENST00000621925 457 ntBASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC243312.2-201ENST00000623340 601 ntBASIC3.34□□□□□ -1.87
PTP4A1Q93096 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
PTP4A1Q93096 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTP4A1Q93096 AC011477.1-204ENST00000623416 1325 ntBASIC3.34□□□□□ -1.87
PTP4A1Q93096 CEP170P1-201ENST00000502249 4587 ntBASIC3.34□□□□□ -1.87
PTP4A1Q93096 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.34□□□□□ -1.88
PTP4A1Q93096 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
PTP4A1Q93096 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 SRP72P2-201ENST00000344851 1979 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 RNU6-799P-201ENST00000363567 107 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 RNU6-1207P-201ENST00000384343 107 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 RN7SKP263-201ENST00000411194 309 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC092573.2-201ENST00000434546 243 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 RPS25P9-201ENST00000435591 252 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 UBE2V1P13-201ENST00000436983 439 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC009237.8-201ENST00000445492 379 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 PTENP1-201ENST00000447117 1215 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 NUTF2P7-201ENST00000453086 375 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 RPS3AP50-201ENST00000487064 803 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 PRELID3BP5-201ENST00000508612 460 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 PCBP2P3-201ENST00000509726 843 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC010587.2-201ENST00000511727 448 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 OR5AP1P-201ENST00000529730 940 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 CYCSP30-201ENST00000546447 172 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AL121766.1-201ENST00000547436 487 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC125611.2-201ENST00000551907 647 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 NBEAP1-201ENST00000554452 979 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 MTND3P19-201ENST00000603825 345 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 MIR6875-201ENST00000617506 72 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC068724.3-201ENST00000625906 87 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC012321.1-201ENST00000561622 1588 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 AC092447.10-201ENST00000620607 1652 ntBASIC3.33□□□□□ -1.88
PTP4A1Q93096 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PTP4A1Q93096 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTP4A1Q93096 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTP4A1Q93096 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTP4A1Q93096 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTP4A1Q93096 RNA5SP42-201ENST00000364278 115 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 RNU6-637P-201ENST00000384050 107 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC083875.1-201ENST00000419509 405 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 DPPA2P1-201ENST00000428060 556 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC084290.1-201ENST00000434995 374 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC108734.1-201ENST00000439549 399 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC007967.1-201ENST00000455422 1159 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms