Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RPS20P21-201ENST00000466859 343 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 MTCO3P38-201ENST00000468910 766 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 RPS3AP17-201ENST00000472594 777 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 ACTR3P3-201ENST00000480448 893 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AP002812.1-201ENST00000495378 474 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AC093853.1-201ENST00000515689 483 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 MTCO2P4-201ENST00000517968 247 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.11□□□□□ -1.59
RTF1Q92541 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.11□□□□□ -1.59
RTF1Q92541 GNRHR2P1-201ENST00000555315 631 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.11□□□□□ -1.59
RTF1Q92541 MTCO3P24-201ENST00000572729 782 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AC009977.1-201ENST00000586015 570 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.11□□□□□ -1.59
RTF1Q92541 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.11□□□□□ -1.59
RTF1Q92541 AC112230.1-201ENST00000604342 547 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AC005344.1-201ENST00000613391 459 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 MIR6864-201ENST00000617935 70 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AC072046.2-201ENST00000618366 268 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AL022578.1-201ENST00000439330 1433 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTF1Q92541 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RTF1Q92541 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RTF1Q92541 MIR448-201ENST00000362131 111 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 RNA5SP391-201ENST00000363456 119 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.1□□□□□ -1.59
RTF1Q92541 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RTF1Q92541 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.1□□□□□ -1.59
RTF1Q92541 SNORD115.1-201ENST00000391109 76 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.1□□□□□ -1.59
RTF1Q92541 AC018644.1-201ENST00000429934 551 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 AL596276.1-201ENST00000434465 418 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 HMGB1P37-201ENST00000439613 609 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 RABEPKP1-201ENST00000440529 1026 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 AP004289.2-201ENST00000444413 1457 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 AL500522.2-201ENST00000448562 343 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.1□□□□□ -1.59
RTF1Q92541 USP9YP34-201ENST00000453983 808 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.1□□□□□ -1.59
RTF1Q92541 AC108941.1-201ENST00000502853 530 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 AC025554.1-201ENST00000505641 188 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RTF1Q92541 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RTF1Q92541 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.1□□□□□ -1.59
RTF1Q92541 RNU6-430P-201ENST00000517078 107 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.1□□□□□ -1.59
RTF1Q92541 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.1□□□□□ -1.59
RTF1Q92541 AC011978.2-201ENST00000569835 2054 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 MIR3913-1-201ENST00000577744 102 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 TPMTP1-201ENST00000592307 737 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 AL161729.4-201ENST00000604650 476 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 AP000860.1-201ENST00000605250 559 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.1□□□□□ -1.59
RTF1Q92541 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.1□□□□□ -1.59
RTF1Q92541 AL159169.3-201ENST00000608871 561 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.1□□□□□ -1.59
RTF1Q92541 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 AL158196.1-201ENST00000616786 434 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 AL445264.1-201ENST00000621719 171 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 CR392039.5-201ENST00000623201 510 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 CR381653.2-201ENST00000624041 768 ntBASIC5.1□□□□□ -1.59
RTF1Q92541 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.1□□□□□ -1.59
RTF1Q92541 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.1□□□□□ -1.59
RTF1Q92541 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTF1Q92541 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
RTF1Q92541 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RTF1Q92541 AC011155.1-201ENST00000316512 456 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
RTF1Q92541 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RTF1Q92541 AC016769.3-201ENST00000396562 315 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AL024474.1-201ENST00000404655 591 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 BTF3P7-201ENST00000407097 488 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 RPL31P52-201ENST00000407532 367 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 C1DP2-201ENST00000418167 426 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AC007742.1-201ENST00000425789 329 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AL445669.1-201ENST00000426743 755 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTF1Q92541 ELOCP26-201ENST00000436067 329 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.09□□□□□ -1.59
RTF1Q92541 MTND6P13-201ENST00000443510 523 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTF1Q92541 AC239809.1-201ENST00000450470 217 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AL162388.1-201ENST00000450912 352 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 EIF4A1P11-201ENST00000451239 222 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 Z82190.1-201ENST00000454534 490 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 BTF3P5-201ENST00000457252 467 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 AC034159.1-201ENST00000513885 583 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.09□□□□□ -1.59
RTF1Q92541 AC104057.1-201ENST00000515547 497 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 SNORA18.6-201ENST00000516792 115 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 RNU6-1003P-201ENST00000517099 105 ntBASIC5.09□□□□□ -1.59
RTF1Q92541 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
RTF1Q92541 AP003467.2-201ENST00000520175 319 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms