Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC096996.1-201ENST00000563813 325 ntBASIC5.73□□□□□ -1.49
SCG3Q8WXD2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 AC022467.1-201ENST00000614738 749 ntBASIC5.73□□□□□ -1.49
SCG3Q8WXD2 AL118522.2-201ENST00000616045 615 ntBASIC5.73□□□□□ -1.49
SCG3Q8WXD2 MIR6133-201ENST00000617057 108 ntBASIC5.73□□□□□ -1.49
SCG3Q8WXD2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCG3Q8WXD2 AL360270.2-201ENST00000562952 5985 ntBASIC5.73□□□□□ -1.49
SCG3Q8WXD2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AL031595.2-201ENST00000624215 19071 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 RNA5SP500-201ENST00000364486 119 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 RNU6-701P-201ENST00000384059 107 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 Y_RNA.428-201ENST00000384078 102 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 RNA5SP111-201ENST00000411386 101 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 GPS2P1-201ENST00000411761 986 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 RPS23P10-201ENST00000416185 486 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 RPL21P109-201ENST00000422213 475 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC113412.1-201ENST00000425840 504 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC117503.1-201ENST00000472241 394 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC103987.1-201ENST00000473394 348 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 RN7SL466P-201ENST00000497546 295 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 ATP5LP3-201ENST00000514223 304 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 RNU6-615P-201ENST00000516065 106 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 RNU6-323P-201ENST00000521915 107 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC104695.3-201ENST00000604052 296 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC090607.5-201ENST00000615692 224 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AL158163.1-201ENST00000603915 1649 ntBASIC5.72□□□□□ -1.49
SCG3Q8WXD2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCG3Q8WXD2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SCG3Q8WXD2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC005592.1-201ENST00000566527 1640 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC074029.4-201ENST00000624796 1859 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC005005.4-201ENST00000623789 16698 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 Y_RNA.473-201ENST00000384333 102 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 Y_RNA.645-201ENST00000391229 102 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AL669831.1-202ENST00000428504 417 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AL591704.1-201ENST00000432574 275 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AP000281.1-201ENST00000444036 316 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 SNORD5.1-201ENST00000458800 75 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 RPS17P5-201ENST00000498293 408 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 SNORD116.3-201ENST00000517176 78 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 Y_RNA.721-201ENST00000517207 102 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 SNORA43.3-201ENST00000517240 103 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC007448.1-201ENST00000582714 234 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC104695.2-201ENST00000605056 775 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AL158032.1-201ENST00000605401 106 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 AC004696.1-201ENST00000614345 607 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 MIR6130-201ENST00000619419 109 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 CDC27P3-201ENST00000635418 1910 ntBASIC5.71□□□□□ -1.5
SCG3Q8WXD2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.71□□□□□ -1.5
SCG3Q8WXD2 SAGE2P-201ENST00000420011 2126 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms