Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC093770.1-201ENST00000511559 571 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 RN7SKP96-201ENST00000516948 297 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AP005205.1-201ENST00000563503 508 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 MIR4446-201ENST00000578505 67 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 RPL23AP92-201ENST00000603609 255 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC018755.4-201ENST00000619715 454 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 CRYM-AS1-204ENST00000637983 556 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 U3.37-201ENST00000408528 213 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 RNU4-78P-201ENST00000410940 126 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 RNU4-74P-201ENST00000411280 161 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AC073264.1-201ENST00000411508 416 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AF274854.1-201ENST00000413236 615 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 BX682237.1-201ENST00000415016 335 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 USP9YP20-201ENST00000419224 558 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 RPL7P29-201ENST00000437151 728 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 OR51B8P-201ENST00000449892 769 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 CKS1BP7-201ENST00000522230 235 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AC103881.1-201ENST00000603476 538 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AC135178.6-201ENST00000605314 398 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AC007619.2-201ENST00000605743 379 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 VIS1.1-201ENST00000610517 203 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 AL136360.1-201ENST00000503377 1900 ntBASIC2.79□□□□□ -1.96
CCDC112Q8NEF3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 FTLP6-201ENST00000355274 422 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 MIR7-1-201ENST00000384871 110 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC019097.1-201ENST00000424783 735 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 SNRPEP4-201ENST00000435815 279 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 Z96811.1-201ENST00000445880 108 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC008280.2-201ENST00000455473 307 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 RPS29P12-201ENST00000460178 152 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 SEM1P1-201ENST00000506694 209 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC107222.1-201ENST00000510899 637 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC105914.1-201ENST00000511798 226 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC118465.1-201ENST00000513820 1271 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC087241.2-201ENST00000535801 324 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 MIR4319-201ENST00000577285 85 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AL645944.1-201ENST00000603857 493 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AL035413.2-201ENST00000604801 525 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 ATP1B3P1-201ENST00000605365 821 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC073111.2-201ENST00000605657 1075 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC011890.2-201ENST00000613393 294 ntBASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC112Q8NEF3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 Y_RNA.493-201ENST00000384422 102 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 RNU6-837P-201ENST00000391056 108 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 MTCO2P17-201ENST00000424336 677 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 HMGB1P47-201ENST00000511281 589 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 DNAJC8P1-201ENST00000554535 372 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AC027807.1-201ENST00000559921 996 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AC087481.2-201ENST00000565492 330 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 MTCYBP28-201ENST00000566728 1132 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 MIR4504-201ENST00000577413 92 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 MIR4435-1-201ENST00000582552 80 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AC110792.4-201ENST00000609843 298 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AP003122.6-201ENST00000623831 495 ntBASIC2.77□□□□□ -1.97
CCDC112Q8NEF3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms