Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 PPIAP15-201ENST00000479662 484 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC105137.1-201ENST00000484355 562 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC112204.1-201ENST00000502591 103 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 CDH12P4-201ENST00000517835 295 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 CDH12P3-201ENST00000517935 295 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 CDH12P1-201ENST00000518435 295 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 COX6CP8-201ENST00000522620 226 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC022861.1-201ENST00000522981 663 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC025627.2-201ENST00000576220 160 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 TPMTP1-201ENST00000592307 737 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 BBIP1P1-201ENST00000602999 279 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AP000860.1-201ENST00000605250 559 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC080013.4-201ENST00000607624 649 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AL159169.3-201ENST00000608871 561 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC090517.2-201ENST00000614966 680 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC011978.2-201ENST00000569835 2054 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AP002001.2-201ENST00000529025 1469 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RNU1-32P-201ENST00000363937 159 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RPL17P50-201ENST00000396131 546 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 MTCO1P17-201ENST00000411522 491 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RPL30P2-201ENST00000414021 291 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 C1DP2-201ENST00000418167 426 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 CHIAP3-201ENST00000423668 1133 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 COX6CP15-201ENST00000426313 211 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC017083.1-201ENST00000428093 483 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC008065.1-201ENST00000428525 348 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 MTND3P21-201ENST00000433774 331 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RBMX2P4-201ENST00000441256 376 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RPS4XP4-201ENST00000443195 763 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 GAPDHP17-201ENST00000449858 1001 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC099563.1-201ENST00000456086 418 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RN7SL93P-201ENST00000463035 293 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RN7SL604P-201ENST00000492589 296 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC091133.4-201ENST00000511142 308 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RN7SKP277-201ENST00000516895 283 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RNU6-430P-201ENST00000517078 107 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 PTP4A1P6-201ENST00000531034 478 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC009643.1-201ENST00000532030 391 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC124947.2-202ENST00000552735 133 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RPL21P5-201ENST00000554662 472 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC022968.1-201ENST00000567372 442 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 MTCO3P24-201ENST00000572729 782 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 RN7SL600P-201ENST00000581811 299 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 VN1R79P-201ENST00000593540 513 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 IPO5P1-202ENST00000600039 287 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 OR6R2P-201ENST00000609216 300 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 MIR6820-201ENST00000611508 62 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AC072046.2-201ENST00000618366 268 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AL158209.2-201ENST00000619266 216 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 MIR8059-201ENST00000620427 81 ntBASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP4Q8N3C7 AL139811.1-201ENST00000424779 2299 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms