Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC007568.1-201ENST00000422912 471 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AC008267.5-201ENST00000424928 265 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX5Q8N196 USMG5P1-201ENST00000425964 177 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX5Q8N196 AC093151.1-201ENST00000427711 313 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 RPS27AP12-201ENST00000429552 465 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 NRBF2P3-201ENST00000432731 865 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 RPL23AP50-201ENST00000434149 455 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 MRPS18BP2-201ENST00000434310 759 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 RPS11P7-201ENST00000442125 465 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AL121871.1-201ENST00000443413 436 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 MRPL48P1-201ENST00000445390 636 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX5Q8N196 TPT1P13-201ENST00000449760 499 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AC009220.1-201ENST00000451614 275 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 CECR9-201ENST00000453421 199 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AZGP1P2-201ENST00000454506 345 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 RNU1-88P-201ENST00000459274 128 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AC006463.2-201ENST00000473326 348 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 CEACAMP10-202ENST00000495431 496 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AC096745.1-201ENST00000509945 370 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 RNU6-699P-201ENST00000517081 110 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX5Q8N196 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.79□□□□□ -1.48
SIX5Q8N196 AC104763.2-201ENST00000604179 382 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AC243312.2-201ENST00000623340 601 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AP002799.1-201ENST00000623552 423 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.79□□□□□ -1.48
SIX5Q8N196 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SIX5Q8N196 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SIX5Q8N196 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SIX5Q8N196 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX5Q8N196 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX5Q8N196 AL451142.2-201ENST00000429076 2090 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIX5Q8N196 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.79□□□□□ -1.48
SIX5Q8N196 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIX5Q8N196 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX5Q8N196 AC107027.3-201ENST00000565095 3473 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX5Q8N196 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIX5Q8N196 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX5Q8N196 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX5Q8N196 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SIX5Q8N196 RNA5SP335-201ENST00000363817 110 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 RNA5SP30-201ENST00000365552 115 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 MIR141-201ENST00000384975 95 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 RNU6-847P-201ENST00000411115 108 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 Z99755.1-201ENST00000414048 380 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 RPL7P37-201ENST00000425095 738 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX5Q8N196 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.78□□□□□ -1.48
SIX5Q8N196 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.78□□□□□ -1.48
SIX5Q8N196 AC083899.1-201ENST00000454465 3819 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 U8.20-201ENST00000459445 131 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 RPL21P103-201ENST00000479921 488 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 RPL38P3-201ENST00000484463 213 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 HMGB1P30-201ENST00000492455 606 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 RN7SL447P-201ENST00000494711 245 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX5Q8N196 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.78□□□□□ -1.48
SIX5Q8N196 AC074255.1-201ENST00000511259 501 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.78□□□□□ -1.48
SIX5Q8N196 MIR2117-201ENST00000516780 80 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.78□□□□□ -1.48
SIX5Q8N196 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.78□□□□□ -1.48
SIX5Q8N196 GNAI2P1-201ENST00000541815 315 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIX5Q8N196 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.78□□□□□ -1.48
SIX5Q8N196 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SIX5Q8N196 MIR4480-201ENST00000582492 71 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 AC006116.3-201ENST00000592968 361 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 PRR13P7-201ENST00000605538 430 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 AC100812.1-201ENST00000607622 580 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX5Q8N196 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX5Q8N196 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX5Q8N196 AL442067.1-201ENST00000613261 223 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX5Q8N196 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX5Q8N196 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SIX5Q8N196 AL137141.1-201ENST00000624622 4836 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIX5Q8N196 STX3-208ENST00000641815 3236 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX5Q8N196 AC020656.2-201ENST00000613291 5309 ntBASIC5.78□□□□□ -1.48
SIX5Q8N196 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.77□□□□□ -1.48
SIX5Q8N196 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIX5Q8N196 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.77□□□□□ -1.49
SIX5Q8N196 AC083843.2-201ENST00000568248 6253 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.77□□□□□ -1.49
SIX5Q8N196 AC104118.1-201ENST00000607625 1589 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 AL591135.1-201ENST00000401578 5914 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.77□□□□□ -1.49
SIX5Q8N196 AL121886.1-201ENST00000358609 435 ntBASIC5.77□□□□□ -1.49
SIX5Q8N196 Y_RNA.2-201ENST00000362330 96 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms