Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PRPF39Q86UA1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.77□□□□□ -1.81
PRPF39Q86UA1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 FRG1BP-201ENST00000278882 761 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 SNORA70.4-201ENST00000365509 134 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL591034.1-201ENST00000407447 340 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 SYF2P2-201ENST00000417620 583 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 HMGN2P31-201ENST00000432430 273 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 MTCYBP34-201ENST00000439552 670 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 EEF1E1P1-201ENST00000446998 430 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 MTND1P31-201ENST00000449206 961 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 U3.44-201ENST00000458938 192 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC106707.2-201ENST00000484182 374 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 CBX3P3-201ENST00000508108 532 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC104619.4-201ENST00000510773 249 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 MTCYBP43-201ENST00000513621 740 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC017037.2-201ENST00000513850 890 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 RNA5SP216-201ENST00000516111 123 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC008011.1-201ENST00000545989 227 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 MIR4738-201ENST00000579134 87 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 COX6CP3-201ENST00000580869 223 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC234772.3-201ENST00000602277 528 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL391001.1-201ENST00000602747 715 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC013444.2-201ENST00000603317 787 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL031281.1-201ENST00000604049 488 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC106900.2-201ENST00000604994 317 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 U3.45-201ENST00000607547 219 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 RNVU1-4-201ENST00000612985 164 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AL136981.2-201ENST00000617319 734 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 U6.98-201ENST00000637157 84 ntBASIC3.76□□□□□ -1.81
PRPF39Q86UA1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PRPF39Q86UA1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AL513185.3-201ENST00000433335 1300 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 TAB3P1-202ENST00000452645 1634 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 RNU6-328P-201ENST00000390887 106 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 RPS3AP26-201ENST00000398259 784 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AL356421.1-201ENST00000403255 413 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 MIR320C1-201ENST00000408566 88 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC093578.1-201ENST00000415219 368 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 HIGD1AP15-201ENST00000416198 280 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 MTCO2P21-201ENST00000419780 677 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 OR6K5P-201ENST00000447050 945 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 RPS3AP46-201ENST00000448352 682 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 RSL24D1P3-201ENST00000449255 495 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC004801.2-202ENST00000463559 283 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 RN7SKP265-201ENST00000516448 223 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 RNU6-714P-201ENST00000516963 103 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC105185.1-201ENST00000518705 535 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 PDCL2P2-201ENST00000533651 189 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms