Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MIR423-201ENST00000362201 94 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 RNU4-21P-201ENST00000362802 126 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 SNORD82-201ENST00000365530 70 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 RNU6-878P-201ENST00000384578 110 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 U8.11-201ENST00000384699 133 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 U8.12-201ENST00000384701 133 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 RHEBP3-201ENST00000411920 351 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AL035423.1-201ENST00000420331 213 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 RSU1P2-202ENST00000437884 485 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 RPL23AP33-201ENST00000442301 452 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 U8.18-201ENST00000459285 133 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AC092754.2-201ENST00000463506 460 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AP000873.1-201ENST00000463987 400 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 TMED11P-201ENST00000479478 690 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 IGKV2-23-201ENST00000518729 323 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 HIGD1AP10-201ENST00000527837 282 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 OR6C7P-201ENST00000547875 934 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AL353997.4-201ENST00000586196 166 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AC025588.3-201ENST00000604182 274 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AC112230.1-201ENST00000604342 547 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 Z69908.1-201ENST00000622603 247 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AL356596.1-201ENST00000624230 379 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 USP8P1-201ENST00000494673 3183 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 AL022578.1-201ENST00000439330 1433 ntBASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNE3Q6ZMZ3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 RNU6-777P-201ENST00000364265 104 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 MIR554-201ENST00000384874 96 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC007066.1-201ENST00000392902 381 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 RPS3AP26-201ENST00000398259 784 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC025750.1-201ENST00000399891 379 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 Z98941.1-201ENST00000407764 100 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 RNA5SP56-201ENST00000410277 118 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 MTCO2P5-201ENST00000422621 426 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 MED14P1-201ENST00000430517 648 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 VN1R108P-201ENST00000431580 830 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 LARP1BP3-201ENST00000437229 869 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 RPS3AP46-201ENST00000448352 682 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 snoU13.3-201ENST00000459441 104 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 RPL7L1P8-201ENST00000469911 741 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 ACTR3P3-201ENST00000480448 893 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AL024509.2-201ENST00000493462 493 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC093677.1-201ENST00000514414 678 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 RNU4-60P-201ENST00000517239 135 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC022861.1-201ENST00000522981 663 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC023161.2-201ENST00000551218 780 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 LLPHP1-201ENST00000603571 367 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC112187.2-201ENST00000604345 283 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AL022161.1-201ENST00000604390 213 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC090186.1-201ENST00000605991 572 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 OR2AS2P-201ENST00000606902 342 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AL391261.4-201ENST00000616012 481 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC008443.7-201ENST00000622195 246 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC004777.1-201ENST00000624317 287 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 AC092192.1-201ENST00000633154 1018 ntBASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SYNE3Q6ZMZ3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms