Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AL356320.1-201ENST00000429616 163 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 RPL23AP49-201ENST00000492925 468 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AC034244.2-201ENST00000514668 858 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 RNU1-41P-201ENST00000516161 162 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 RNU1-48P-201ENST00000516400 162 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 COX6B1P6-201ENST00000522347 255 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 AC008432.1-201ENST00000615912 1320 ntBASIC2.69□□□□□ -1.98
CCDC171Q6TFL3 RNU6-697P-201ENST00000363348 107 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 RNU6-618P-201ENST00000363518 112 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 MIR221-201ENST00000385135 110 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 MTCYBP7-201ENST00000419540 1134 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 ATP5F1P1-201ENST00000433775 569 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AL121890.1-201ENST00000435457 205 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 RPS29P12-201ENST00000460178 152 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 CENPUP2-201ENST00000555897 1186 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AP003117.1-201ENST00000602771 554 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC093536.2-201ENST00000565257 1406 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 HMGB1P11-201ENST00000413899 637 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC023424.2-201ENST00000493479 777 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 RNU1-61P-201ENST00000516107 151 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 RNA5SP82-201ENST00000516707 92 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 MYL12BP1-201ENST00000569826 507 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC022884.3-201ENST00000579571 248 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC245128.3-201ENST00000594721 748 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AC009831.4-201ENST00000620744 325 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 AP003122.6-201ENST00000623831 495 ntBASIC2.68□□□□□ -1.98
CCDC171Q6TFL3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 AC138915.1-201ENST00000565427 1685 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 RN7SKP223-201ENST00000410582 62 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 Z98742.3-201ENST00000418637 326 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 FNDC3CP-201ENST00000420795 1155 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 AC092427.1-202ENST00000430569 476 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 TTC39CP1-201ENST00000512513 755 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 DNAJC8P1-201ENST00000554535 372 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 MIR3124-201ENST00000582636 67 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 AP001029.3-201ENST00000588063 596 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 AC013562.2-201ENST00000611632 603 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 MIR6715A-201ENST00000615929 79 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.67□□□□□ -1.98
CCDC171Q6TFL3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 MIRLET7G-201ENST00000362280 84 ntBASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 RNU1-91P-201ENST00000364746 163 ntBASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 MIR144-201ENST00000384886 86 ntBASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 MTND4P11-201ENST00000417020 1058 ntBASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 AL353705.4-201ENST00000449661 238 ntBASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 OR4R1P-201ENST00000529879 463 ntBASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC171Q6TFL3 AC244517.1-201ENST00000606030 2086 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms