Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC073348.1-201ENST00000623002 331 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC092184.1-201ENST00000625042 715 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC006927.4-201ENST00000639187 543 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 MKKS-204ENST00000639674 192 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RFWD3Q6PCD5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC117529.2-201ENST00000512159 2068 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 Y_RNA.465-201ENST00000384293 102 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 MIR649-201ENST00000384843 97 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 MTCO2P21-201ENST00000419780 677 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC006960.1-201ENST00000419980 153 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 MTCO3P1-205ENST00000422088 832 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AL353678.1-201ENST00000422735 741 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC096632.1-201ENST00000427395 310 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AL591719.1-201ENST00000444669 744 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AP002884.2-201ENST00000471647 395 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC092185.1-201ENST00000491371 97 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 KCTD9P5-201ENST00000504141 1170 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 SNORA74D-201ENST00000516404 141 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC027309.2-201ENST00000520566 192 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC009097.3-201ENST00000563557 1018 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC061975.8-201ENST00000587058 721 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC025588.2-201ENST00000604851 466 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC092106.3-201ENST00000611308 722 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC005332.6-201ENST00000613178 446 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC109809.1-201ENST00000619665 545 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 MIR8057-201ENST00000620957 69 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AP000676.4-201ENST00000624659 623 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC109315.1-201ENST00000584143 1347 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 ZNF876P-202ENST00000398732 1485 ntBASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFWD3Q6PCD5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 RNU5D-1-201ENST00000363299 116 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 SNORA7.2-201ENST00000364446 145 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 SNORA51.2-201ENST00000364595 132 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 BTBD10P2-201ENST00000404779 676 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AL355379.1-201ENST00000405542 640 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 RNA5SP80-201ENST00000410475 111 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 RNU2-42P-201ENST00000410697 113 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 EI24P1-201ENST00000416584 867 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AL512649.1-201ENST00000428997 581 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 COX7BP2-201ENST00000437976 242 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 RN7SL863P-201ENST00000462370 296 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 VN1R17P-201ENST00000472048 1090 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC012181.1-201ENST00000479895 423 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 KLRA1P-201ENST00000503499 986 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 POU5F1P7-201ENST00000508759 541 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC016065.2-201ENST00000514530 444 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 RN7SKP31-201ENST00000516354 278 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 RN7SKP277-201ENST00000516895 283 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 RNU6-1261P-201ENST00000517194 104 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 NBEAP1-201ENST00000554452 979 ntBASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.32□□□□□ -1.88
RFWD3Q6PCD5 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms