Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 GNG5P1-201ENST00000255500 204 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 Y_RNA.41-201ENST00000362646 102 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 RNY4P16-201ENST00000364768 94 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 U3.42-201ENST00000408746 214 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 RNU6-195P-201ENST00000411352 109 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 UBE2D3P2-201ENST00000424409 445 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 RNU7-59P-201ENST00000459101 61 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC146944.2-203ENST00000502493 354 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 UBE2CP3-201ENST00000502715 450 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC139495.1-202ENST00000513164 354 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 OR7H2P-201ENST00000513483 306 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 Y_RNA.672-201ENST00000516289 104 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 FAM60DP-201ENST00000524174 632 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AP001880.2-201ENST00000538233 448 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC009063.1-201ENST00000563342 702 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC011468.4-201ENST00000603942 409 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AL139286.2-201ENST00000606838 396 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 FAM27B-201ENST00000610601 213 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 TUG1_2.1-201ENST00000614234 87 ntBASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PPP4R4Q6NUP7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 RNU5E-1-201ENST00000362477 120 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 RNU5A-8P-201ENST00000364102 114 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 SNORA23-201ENST00000365128 182 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL590762.2-201ENST00000395798 571 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL109755.1-201ENST00000401791 649 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 RNA5SP39-201ENST00000411245 120 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 RPL37P18-201ENST00000411602 243 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 HMGB3P23-201ENST00000414981 585 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL049745.1-201ENST00000433953 286 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC099563.1-201ENST00000456086 418 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC092324.1-201ENST00000468671 324 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL359273.1-201ENST00000510918 627 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 FTH1P21-201ENST00000512179 511 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 BGLT3-201ENST00000564523 994 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC007599.1-201ENST00000568688 1174 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC005951.1-201ENST00000576706 485 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 ZNF415P1-201ENST00000582279 1166 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC091178.1-203ENST00000584586 279 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC091805.2-201ENST00000603848 235 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC109347.2-201ENST00000610220 349 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC245517.5-201ENST00000611529 162 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC122108.2-201ENST00000611946 526 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC005332.10-201ENST00000612725 619 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC008498.1-201ENST00000613012 531 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AL732618.1-201ENST00000623251 301 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 PISRT1-201ENST00000626175 531 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 SDAD1P2-201ENST00000441308 2028 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 AC066616.2-201ENST00000559334 1481 ntBASIC4.36□□□□□ -1.71
PPP4R4Q6NUP7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 RNY4P34-201ENST00000364779 95 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 RPS3AP36-201ENST00000398190 775 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms