Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 OR8R1P-201ENST00000543943 764 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 BNIP3P1-201ENST00000547295 580 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC063949.1-201ENST00000552900 865 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC018552.1-201ENST00000562099 811 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC138761.3-201ENST00000579993 334 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC011890.2-201ENST00000613393 294 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AL355810.1-201ENST00000614629 552 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 MTCO1P7-201ENST00000419523 1542 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AL158163.1-201ENST00000603915 1649 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF43Q68DV7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF43Q68DV7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF43Q68DV7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF43Q68DV7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF43Q68DV7 RNU6-317P-201ENST00000384031 107 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 Y_RNA.496-201ENST00000384444 101 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 MIR192-201ENST00000384915 110 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 EIF5P1-201ENST00000400019 1231 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 RNU2-29P-201ENST00000410423 189 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 RN7SKP126-201ENST00000411143 300 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC007738.1-201ENST00000413892 348 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 MTATP6P16-201ENST00000434543 526 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 MTCO3P45-201ENST00000443036 613 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AL118520.1-201ENST00000450770 291 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 NANOGP10-201ENST00000453325 895 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 RNU7-182P-201ENST00000459009 62 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 RNA5SP103-201ENST00000459503 118 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 RPL23AP41-201ENST00000484754 458 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 Y_RNA.654-201ENST00000497848 106 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 RNU6-408P-201ENST00000515910 100 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC090136.1-201ENST00000520009 240 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 RPL21P12-201ENST00000559810 515 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 MIR4775-201ENST00000581168 75 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC008687.2-201ENST00000597865 520 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC104662.1-201ENST00000604448 511 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 EIF3FP1-201ENST00000613970 806 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 uc_338.34-201ENST00000617467 174 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC243312.2-201ENST00000623340 601 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
RNF43Q68DV7 MIR7641-1-201ENST00000627518 61 ntBASIC5.4□□□□□ -1.54
RNF43Q68DV7 KPNA2P1-201ENST00000458289 1591 ntBASIC5.4□□□□□ -1.55
RNF43Q68DV7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF43Q68DV7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF43Q68DV7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.4□□□□□ -1.55
RNF43Q68DV7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF43Q68DV7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF43Q68DV7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF43Q68DV7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF43Q68DV7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.4□□□□□ -1.55
RNF43Q68DV7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF43Q68DV7 AC121333.1-201ENST00000567488 2709 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF43Q68DV7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF43Q68DV7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF43Q68DV7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF43Q68DV7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF43Q68DV7 RNU6-874P-201ENST00000362390 105 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 RNA5SP123-201ENST00000363244 119 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 Y_RNA.117-201ENST00000363294 101 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 RNU6-33P-201ENST00000384793 107 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF43Q68DV7 UBE2V1P2-201ENST00000397758 440 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 AL359643.1-201ENST00000404109 423 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 RPL6P29-201ENST00000414863 865 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 HMGB1P9-201ENST00000429856 646 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 KNOP1P3-201ENST00000446933 426 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 NOP56P2-201ENST00000447491 769 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms