Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 RPS7P15-201ENST00000415804 584 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC099336.2-201ENST00000422457 254 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 MTND2P23-201ENST00000422990 651 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC104308.1-201ENST00000454621 333 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC099560.2-201ENST00000457554 255 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AL049714.1-201ENST00000466686 347 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 KLHL2P1-201ENST00000508691 521 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 FTH1P21-201ENST00000512179 511 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 RNU4-29P-201ENST00000515943 174 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 PSMA2P1-201ENST00000526365 646 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC021646.1-201ENST00000605469 484 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC244100.1-202ENST00000621554 382 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 C2orf27A-204ENST00000623058 969 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 DHX9P1-201ENST00000436565 3076 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AL672167.1-204ENST00000641875 3017 ntBASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
USPL1Q5W0Q7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 STX3-208ENST00000641815 3236 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 OR1S2-201ENST00000302592 978 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 RNU1-64P-201ENST00000365443 163 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 Y_RNA.367-201ENST00000365544 101 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 MIR514A2-201ENST00000385131 88 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 MIR514A3-201ENST00000385132 88 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 MIR454-201ENST00000390180 115 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 CTSL3P-202ENST00000412179 788 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AC004987.3-201ENST00000413879 771 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 RPS12P10-201ENST00000427031 377 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 OR4C10P-201ENST00000434991 931 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 Y_RNA.632-201ENST00000459189 102 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 snoU13.7-201ENST00000459220 104 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 SCARNA10-201ENST00000459255 330 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 RN7SL810P-201ENST00000493031 276 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 RNU4-49P-201ENST00000516080 140 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AC024224.1-201ENST00000538284 609 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 FKBP1BP1-201ENST00000553366 325 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AL360085.1-201ENST00000604713 532 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AC116447.1-201ENST00000613153 453 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AL023881.1-201ENST00000621088 301 ntBASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.85□□□□□ -1.47
USPL1Q5W0Q7 AC004972.1-201ENST00000623934 2209 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 U3.11-201ENST00000364476 212 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms