Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC067959.1-201ENST00000604334 379 ntBASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 AL109618.2-201ENST00000605527 211 ntBASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 U6atac.1-201ENST00000616025 117 ntBASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 AL158209.2-201ENST00000619266 216 ntBASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 AC243312.2-201ENST00000623340 601 ntBASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 SEPT14P19-203ENST00000633205 211 ntBASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC144BQ3MJ40 AC087190.4-201ENST00000574616 8334 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC005832.2-201ENST00000538921 1430 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 OR1S2-201ENST00000302592 978 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 RNU6-173P-201ENST00000364215 104 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 MIR181A1-201ENST00000385026 110 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 RN7SKP27-201ENST00000410684 333 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 RN7SKP263-201ENST00000411194 309 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 UBE2V1P10-201ENST00000414685 269 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 FCF1P1-201ENST00000432690 571 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 MTND1P4-201ENST00000435196 415 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC004866.2-201ENST00000438285 481 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 RPS24P6-201ENST00000452670 400 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 snoU13.24-201ENST00000458998 104 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC010285.1-201ENST00000470580 392 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC126182.1-201ENST00000478134 357 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC078918.1-201ENST00000498515 228 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC020893.1-201ENST00000502452 580 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 MLLT10P2-201ENST00000506434 249 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 MTCO1P35-201ENST00000515270 228 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 RN7SKP244-201ENST00000516513 307 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC109635.4-202ENST00000531666 412 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC100770.1-201ENST00000532310 322 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 CYCSP29-201ENST00000533731 318 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 BNIP3P33-201ENST00000598912 569 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 RPL7P50-201ENST00000600588 727 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AL022099.1-201ENST00000604551 712 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AP000860.1-201ENST00000605250 559 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC124864.2-201ENST00000624736 186 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC055839.1-201ENST00000634467 498 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AC125257.1-201ENST00000560400 2930 ntBASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC144BQ3MJ40 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC116667.1-201ENST00000604855 2072 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 U3.11-201ENST00000364476 212 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 RNU6-1103P-201ENST00000384150 107 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 SNORA70C-201ENST00000384538 135 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 SDHCP2-201ENST00000398565 501 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 VDAC1P9-201ENST00000412766 841 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC011933.1-201ENST00000413334 321 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 NPM1P49-201ENST00000448027 714 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC093899.1-201ENST00000457984 376 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC116533.1-201ENST00000459748 321 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AL049714.1-201ENST00000466686 347 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 RPL23AP2-201ENST00000471227 466 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC007182.2-201ENST00000489251 402 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 AC023194.1-201ENST00000493084 308 ntBASIC5.16□□□□□ -1.58
CCDC144BQ3MJ40 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms