Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MTCO3P35-201ENST00000485582 781 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC093591.1-201ENST00000491435 481 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RPL9P6-201ENST00000492764 598 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RPL23AP49-201ENST00000492925 468 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RPL21P16-201ENST00000495531 483 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RNA5SP402-201ENST00000517148 110 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC025881.1-201ENST00000518851 512 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC026464.5-201ENST00000562497 722 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 DEFB122-202ENST00000569013 197 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC068313.1-201ENST00000604028 1008 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AP003122.6-201ENST00000623831 495 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC093591.3-201ENST00000634516 308 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC241585.2-209ENST00000638217 143 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC073055.1-201ENST00000456901 1621 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RNA5SP99-201ENST00000364020 114 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 U3.37-201ENST00000408528 213 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC244098.2-201ENST00000422068 99 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 SRIP2-201ENST00000428470 166 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC093716.1-201ENST00000435923 377 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 TRBV26-201ENST00000456572 344 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC104472.2-201ENST00000469035 601 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC090071.1-201ENST00000507713 644 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 NF1P10-201ENST00000613227 742 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC009831.4-201ENST00000620744 325 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC091046.2-201ENST00000620775 665 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 Z99496.1-201ENST00000469424 1477 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RFX7Q2KHR2 RPL21P132-201ENST00000331267 462 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 RNU1-51P-201ENST00000365345 176 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 RNU4-65P-201ENST00000410473 140 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 HMGB1P11-201ENST00000413899 637 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AC107081.1-201ENST00000414975 361 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AC005517.2-201ENST00000424673 553 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 HMGN2P3-201ENST00000433603 273 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 HMGN2P5-201ENST00000436882 273 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.73□□□□□ -1.97
RFX7Q2KHR2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX7Q2KHR2 RPL30P9-201ENST00000465586 330 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 OR4G11P-201ENST00000492842 939 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 RPL21P131-201ENST00000497298 483 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AC008716.1-201ENST00000511084 513 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AP001317.1-201ENST00000531194 960 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AC025811.1-201ENST00000604312 472 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AC013562.2-201ENST00000611632 603 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AL354950.1-201ENST00000614150 568 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 AC099063.3-201ENST00000642066 185 ntBASIC2.73□□□□□ -1.97
RFX7Q2KHR2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 AL137014.1-201ENST00000420490 1226 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 DPH3P2-201ENST00000422618 250 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 AL603825.1-201ENST00000438481 80 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 RPL23AP33-201ENST00000442301 452 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 RPL34P26-201ENST00000445636 354 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 MTND5P4-201ENST00000514978 288 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 RNA5SP200-201ENST00000516360 103 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.72□□□□□ -1.97
RFX7Q2KHR2 MTCYBP20-201ENST00000524239 1129 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 SNRPGP18-201ENST00000553000 214 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 YWHAZP1-201ENST00000556286 722 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 AL162233.1-201ENST00000620014 944 ntBASIC2.72□□□□□ -1.97
RFX7Q2KHR2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.71□□□□□ -1.97
RFX7Q2KHR2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 SNORD114-1-201ENST00000362705 72 ntBASIC2.71□□□□□ -1.98
RFX7Q2KHR2 DHFRP5-201ENST00000406944 564 ntBASIC2.71□□□□□ -1.98
RFX7Q2KHR2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 AC092427.1-202ENST00000430569 476 ntBASIC2.71□□□□□ -1.98
RFX7Q2KHR2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 AC104058.1-201ENST00000448028 297 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms