Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 AL356320.1-201ENST00000429616 163 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 MTCO1P43-201ENST00000431831 488 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCH1Q13635 AL590103.1-201ENST00000434488 307 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 BTBD7P2-201ENST00000441962 620 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 AL592437.1-201ENST00000443781 492 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCH1Q13635 AC133134.1-201ENST00000466800 359 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 RPS27P23-201ENST00000487608 251 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCH1Q13635 USP9YP5-201ENST00000511770 630 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCH1Q13635 HIGD1AP6-201ENST00000521833 279 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 HMGB1P1-201ENST00000522557 636 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.63□□□□□ -1.83
PTCH1Q13635 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCH1Q13635 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCH1Q13635 AC009063.1-201ENST00000563342 702 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCH1Q13635 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.63□□□□□ -1.83
PTCH1Q13635 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.63□□□□□ -1.83
PTCH1Q13635 AC091948.2-201ENST00000636510 279 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCH1Q13635 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCH1Q13635 AC092881.1-201ENST00000638218 2733 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTCH1Q13635 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCH1Q13635 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCH1Q13635 AC025263.3-201ENST00000622965 1396 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTCH1Q13635 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PTCH1Q13635 MIR27B-201ENST00000385129 97 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 RNU6-77P-201ENST00000410554 91 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 RPLP0P7-201ENST00000416050 667 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 PAICSP7-201ENST00000419829 962 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 MTND2P16-201ENST00000419987 799 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 AC010881.1-201ENST00000433830 235 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 RPL7P55-201ENST00000450522 746 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 HMGN3P1-201ENST00000453847 193 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.62□□□□□ -1.83
PTCH1Q13635 RNA5SP458-201ENST00000516188 119 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 SNORA9.3-201ENST00000516383 129 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 AL391156.1-201ENST00000554965 554 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 ZNF192P1-203ENST00000565888 810 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.62□□□□□ -1.83
PTCH1Q13635 AC006213.5-201ENST00000619673 288 ntBASIC3.62□□□□□ -1.83
PTCH1Q13635 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.62□□□□□ -1.83
PTCH1Q13635 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTCH1Q13635 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PTCH1Q13635 MIR16-2-201ENST00000362117 81 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 RNU6-600P-201ENST00000362524 99 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 RNU6-335P-201ENST00000364563 113 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 RNU6-444P-201ENST00000383988 108 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AL138880.1-201ENST00000405824 642 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCH1Q13635 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.61□□□□□ -1.83
PTCH1Q13635 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCH1Q13635 RAB11AP1-201ENST00000442978 646 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 RPS26P30-201ENST00000443431 335 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 FAM103A2P-201ENST00000444122 354 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCH1Q13635 SYPL1P1-201ENST00000473622 768 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.61□□□□□ -1.83
PTCH1Q13635 RPL21P47-201ENST00000483696 477 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 DYNLL1P6-201ENST00000503440 264 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC104057.1-201ENST00000515547 497 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC124293.1-201ENST00000530034 493 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
PTCH1Q13635 AC025811.1-201ENST00000604312 472 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC103810.6-201ENST00000606708 136 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AP006248.3-201ENST00000623580 594 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 PISRT1-201ENST00000626175 531 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCH1Q13635 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.61□□□□□ -1.83
PTCH1Q13635 AC091564.4-201ENST00000533934 2194 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PTCH1Q13635 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCH1Q13635 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.61□□□□□ -1.83
PTCH1Q13635 ZNF37BP-203ENST00000452306 1352 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC016717.2-201ENST00000609089 5141 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCH1Q13635 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCH1Q13635 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTCH1Q13635 RNVU1-3-201ENST00000364313 161 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 MIR181A2-201ENST00000384863 110 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 MT-TC-201ENST00000387405 66 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AL590004.2-201ENST00000404787 371 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 AC096632.1-201ENST00000427395 310 ntBASIC3.61□□□□□ -1.83
PTCH1Q13635 FCF1P1-201ENST00000432690 571 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms