Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RAB40BQ12829 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RAB40BQ12829 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RAB40BQ12829 RNU1-70P-201ENST00000362618 164 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 RNU4-68P-201ENST00000364314 141 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.92□□□□□ -1.94
RAB40BQ12829 ERHP2-201ENST00000402323 299 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AL035423.1-201ENST00000420331 213 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40BQ12829 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 USP9YP11-201ENST00000427537 717 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40BQ12829 NEK4P1-201ENST00000433383 879 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RAB40BQ12829 CDC27P1-201ENST00000445384 715 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40BQ12829 PAICSP4-201ENST00000517543 1253 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 OR5AK1P-201ENST00000524837 922 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AC103843.2-201ENST00000530523 682 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40BQ12829 UBE2NP1-201ENST00000545592 458 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.92□□□□□ -1.94
RAB40BQ12829 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AC055876.1-202ENST00000567053 138 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 COX6CP3-201ENST00000580869 223 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AC006130.2-201ENST00000586202 326 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AP001269.3-201ENST00000588718 329 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 BDH2P1-201ENST00000602288 736 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AL022099.1-201ENST00000604551 712 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AL451074.6-201ENST00000608512 729 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AC106028.5-201ENST00000610332 395 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.92□□□□□ -1.94
RAB40BQ12829 CRYM-AS1-204ENST00000637983 556 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.92□□□□□ -1.94
RAB40BQ12829 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AC002546.1-201ENST00000588041 2504 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
RAB40BQ12829 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
RAB40BQ12829 AL356473.1-201ENST00000406203 1408 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.92□□□□□ -1.94
RAB40BQ12829 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.91□□□□□ -1.94
RAB40BQ12829 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RAB40BQ12829 SNORA51.4-201ENST00000364993 124 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RAB40BQ12829 MIR591-201ENST00000385290 95 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AL031679.1-201ENST00000400616 525 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 HMGB1P17-201ENST00000403495 628 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AL356131.1-201ENST00000405826 414 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 TIMM9P2-201ENST00000419324 266 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AC092648.1-201ENST00000425870 423 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AL035246.1-201ENST00000433554 1255 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AC004866.2-201ENST00000438285 481 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AC122718.1-201ENST00000439448 744 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RAB40BQ12829 RPL26P28-201ENST00000451325 435 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.91□□□□□ -1.94
RAB40BQ12829 FAM133DP-201ENST00000464802 691 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 MTND1P16-201ENST00000465177 898 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AC012181.1-201ENST00000479895 423 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 RPL7P38-201ENST00000488396 739 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.91□□□□□ -1.94
RAB40BQ12829 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RAB40BQ12829 AL391156.1-201ENST00000554965 554 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AL512347.1-201ENST00000566420 503 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 RNU4-5P-201ENST00000607255 135 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AL356863.1-201ENST00000623378 1080 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 AL136164.4-201ENST00000625013 2135 ntBASIC2.91□□□□□ -1.94
RAB40BQ12829 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RAB40BQ12829 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.91□□□□□ -1.94
RAB40BQ12829 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.91□□□□□ -1.94
RAB40BQ12829 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.91□□□□□ -1.94
RAB40BQ12829 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
RAB40BQ12829 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RAB40BQ12829 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RAB40BQ12829 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.9□□□□□ -1.94
RAB40BQ12829 AL079343.1-201ENST00000572358 1771 ntBASIC2.9□□□□□ -1.94
RAB40BQ12829 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
RAB40BQ12829 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms