Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LTBQ06643 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LTBQ06643 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.78□□□□□ -1.8
LTBQ06643 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LTBQ06643 AC006378.2-201ENST00000623178 2476 ntBASIC3.78□□□□□ -1.8
LTBQ06643 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
LTBQ06643 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LTBQ06643 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.77□□□□□ -1.81
LTBQ06643 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.77□□□□□ -1.81
LTBQ06643 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LTBQ06643 OR11H4-201ENST00000315409 1082 ntBASIC3.77□□□□□ -1.81
LTBQ06643 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LTBQ06643 RNU6-984P-201ENST00000363236 109 ntBASIC3.77□□□□□ -1.81
LTBQ06643 RNU6-289P-201ENST00000364093 107 ntBASIC3.77□□□□□ -1.81
LTBQ06643 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
LTBQ06643 RNU6-444P-201ENST00000383988 108 ntBASIC3.77□□□□□ -1.81
LTBQ06643 MIR491-201ENST00000384877 84 ntBASIC3.77□□□□□ -1.81
LTBQ06643 MIR634-201ENST00000385208 97 ntBASIC3.77□□□□□ -1.81
LTBQ06643 CALM2P3-201ENST00000400429 449 ntBASIC3.77□□□□□ -1.81
LTBQ06643 MIR1277-201ENST00000408536 78 ntBASIC3.77□□□□□ -1.81
LTBQ06643 MIR1179-201ENST00000408703 91 ntBASIC3.77□□□□□ -1.81
LTBQ06643 RNA5SP306-201ENST00000411087 107 ntBASIC3.77□□□□□ -1.81
LTBQ06643 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 BX295541.1-201ENST00000417774 250 ntBASIC3.77□□□□□ -1.81
LTBQ06643 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.77□□□□□ -1.81
LTBQ06643 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.77□□□□□ -1.81
LTBQ06643 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 AC018644.1-201ENST00000429934 551 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.77□□□□□ -1.81
LTBQ06643 AC023347.2-201ENST00000433994 462 ntBASIC3.77□□□□□ -1.81
LTBQ06643 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 MTATP6P30-201ENST00000443540 664 ntBASIC3.77□□□□□ -1.81
LTBQ06643 RPL21P89-201ENST00000444021 467 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.77□□□□□ -1.81
LTBQ06643 MTCO1P48-201ENST00000448024 1096 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AL162151.2-201ENST00000448875 158 ntBASIC3.77□□□□□ -1.81
LTBQ06643 HMGB3P21-201ENST00000452483 547 ntBASIC3.77□□□□□ -1.81
LTBQ06643 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.77□□□□□ -1.81
LTBQ06643 OR6K1P-201ENST00000456766 971 ntBASIC3.77□□□□□ -1.81
LTBQ06643 RNU7-136P-201ENST00000458819 69 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC006517.1-201ENST00000480485 328 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC069439.1-201ENST00000494739 167 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC012170.1-201ENST00000495139 359 ntBASIC3.77□□□□□ -1.81
LTBQ06643 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.77□□□□□ -1.81
LTBQ06643 AL592156.1-201ENST00000508758 304 ntBASIC3.77□□□□□ -1.81
LTBQ06643 KCTD9P2-201ENST00000512203 1013 ntBASIC3.77□□□□□ -1.81
LTBQ06643 SNORA74D-201ENST00000516404 141 ntBASIC3.77□□□□□ -1.81
LTBQ06643 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC068587.4-201ENST00000533893 186 ntBASIC3.77□□□□□ -1.81
LTBQ06643 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.77□□□□□ -1.81
LTBQ06643 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.77□□□□□ -1.81
LTBQ06643 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.77□□□□□ -1.81
LTBQ06643 SULT1C2P1-202ENST00000562418 459 ntBASIC3.77□□□□□ -1.81
LTBQ06643 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.77□□□□□ -1.81
LTBQ06643 AC012417.1-201ENST00000582307 1039 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AL161729.3-201ENST00000603533 673 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC084757.4-201ENST00000616350 526 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC099669.2-201ENST00000616549 437 ntBASIC3.77□□□□□ -1.81
LTBQ06643 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.77□□□□□ -1.81
LTBQ06643 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC136475.10-201ENST00000620253 385 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AC103858.2-201ENST00000621471 543 ntBASIC3.77□□□□□ -1.81
LTBQ06643 MIR4727-201ENST00000622232 55 ntBASIC3.77□□□□□ -1.81
LTBQ06643 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.77□□□□□ -1.81
LTBQ06643 AC068880.5-201ENST00000624331 290 ntBASIC3.77□□□□□ -1.81
LTBQ06643 MIR6863-201ENST00000636112 90 ntBASIC3.77□□□□□ -1.81
LTBQ06643 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LTBQ06643 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.77□□□□□ -1.81
LTBQ06643 SAGE2P-201ENST00000420011 2126 ntBASIC3.77□□□□□ -1.81
LTBQ06643 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
LTBQ06643 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.77□□□□□ -1.81
LTBQ06643 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
LTBQ06643 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LTBQ06643 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.77□□□□□ -1.81
LTBQ06643 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
LTBQ06643 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.76□□□□□ -1.81
LTBQ06643 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
LTBQ06643 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LTBQ06643 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
LTBQ06643 AL049555.1-201ENST00000562834 1933 ntBASIC3.76□□□□□ -1.81
LTBQ06643 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LTBQ06643 AP002001.2-201ENST00000529025 1469 ntBASIC3.76□□□□□ -1.81
LTBQ06643 RNU6-780P-201ENST00000391030 104 ntBASIC3.76□□□□□ -1.81
LTBQ06643 HSPD1P16-201ENST00000402302 394 ntBASIC3.76□□□□□ -1.81
LTBQ06643 AL590002.1-201ENST00000406554 418 ntBASIC3.76□□□□□ -1.81
LTBQ06643 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.76□□□□□ -1.81
LTBQ06643 MIR320C1-201ENST00000408566 88 ntBASIC3.76□□□□□ -1.81
LTBQ06643 Y_RNA.608-201ENST00000410647 95 ntBASIC3.76□□□□□ -1.81
LTBQ06643 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.76□□□□□ -1.81
LTBQ06643 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.76□□□□□ -1.81
LTBQ06643 AL358934.1-201ENST00000432346 324 ntBASIC3.76□□□□□ -1.81
LTBQ06643 BTF3P10-201ENST00000433415 495 ntBASIC3.76□□□□□ -1.81
LTBQ06643 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LTBQ06643 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.76□□□□□ -1.81
LTBQ06643 AL451074.3-201ENST00000437709 472 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms