Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 AC253576.2-201ENST00000618815 580 ntBASIC3.08□□□□□ -1.92
TNFRSF17Q02223 AP000720.1-201ENST00000625091 483 ntBASIC3.08□□□□□ -1.92
TNFRSF17Q02223 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF17Q02223 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF17Q02223 OR4G11P-202ENST00000642116 1414 ntBASIC3.08□□□□□ -1.92
TNFRSF17Q02223 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TNFRSF17Q02223 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFRSF17Q02223 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC004972.1-201ENST00000623934 2209 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 RNU6-657P-201ENST00000383904 107 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 MIR506-201ENST00000384998 124 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 RNU6-882P-201ENST00000391025 103 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 PSMA6P3-201ENST00000428242 164 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AL353705.1-201ENST00000433468 480 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC011242.1-201ENST00000433596 1158 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 RPL23AP83-201ENST00000434984 473 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 MUPP-201ENST00000438111 566 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 ISCA1P2-201ENST00000438679 421 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AL359385.1-201ENST00000456509 365 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 RPS4XP10-201ENST00000465034 731 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC110794.1-201ENST00000505816 425 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC008837.1-201ENST00000511513 412 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 SNORA70.16-201ENST00000516390 95 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AP001189.2-201ENST00000527320 189 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 CKS1BP3-201ENST00000600888 237 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AL031176.1-201ENST00000604554 466 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC004832.5-201ENST00000608677 401 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC124016.2-201ENST00000610058 665 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC009464.1-201ENST00000615731 469 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC073476.4-201ENST00000628409 72 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 AC087821.2-201ENST00000637086 450 ntBASIC3.07□□□□□ -1.92
TNFRSF17Q02223 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TNFRSF17Q02223 RNU6-236P-201ENST00000363886 106 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 RNA5SP72-201ENST00000364442 117 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 RPL17P50-201ENST00000396131 546 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 TAF9BP1-201ENST00000396646 746 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 RNA5SP107-201ENST00000411358 122 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC063979.1-201ENST00000415539 377 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 C1DP1-201ENST00000426049 402 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC092634.2-201ENST00000428146 1010 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 FTH1P1-201ENST00000437933 532 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 ARF4P4-201ENST00000439608 520 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 VN1R10P-201ENST00000447106 875 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC115115.1-201ENST00000449927 248 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC092757.1-201ENST00000467293 467 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC114967.1-201ENST00000504890 259 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 SUMO2P5-201ENST00000506790 245 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC010460.2-201ENST00000509054 677 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 OR4H12P-201ENST00000556269 907 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 RPL21P12-201ENST00000559810 515 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC008507.1-201ENST00000587506 734 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC007179.3-201ENST00000604976 235 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC107294.3-201ENST00000609211 526 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AL157770.1-201ENST00000623049 439 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC126544.2-201ENST00000625174 749 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 GABRG2-229ENST00000641017 3628 ntBASIC3.06□□□□□ -1.92
TNFRSF17Q02223 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFRSF17Q02223 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF17Q02223 AC087359.1-201ENST00000508335 1740 ntBASIC3.05□□□□□ -1.92
TNFRSF17Q02223 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF17Q02223 Y_RNA.578-201ENST00000390903 88 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms