Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 FRG1DP-201ENST00000635586 771 ntBASIC1.47□□□□□ -2.17
PRKDCP78527 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.47□□□□□ -2.17
PRKDCP78527 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.46□□□□□ -2.18
PRKDCP78527 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 MIR142-201ENST00000384835 87 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.46□□□□□ -2.18
PRKDCP78527 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.46□□□□□ -2.18
PRKDCP78527 RPL9P33-201ENST00000484311 566 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 AC011352.3-201ENST00000505162 593 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 RFPL1S-203ENST00000539579 330 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 AC017076.1-201ENST00000607613 578 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 BX664608.1-201ENST00000610519 487 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 Y_RNA.783-201ENST00000613546 102 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 MIR6766-201ENST00000622641 72 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.46□□□□□ -2.18
PRKDCP78527 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 AC008526.1-201ENST00000509149 338 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 RNA5SP220-201ENST00000516298 104 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 IGKV2D-36-201ENST00000518643 226 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 HMGB1P41-201ENST00000520234 440 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 MIR3199-2-201ENST00000636243 86 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 MED6P1-201ENST00000439659 713 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 AC022634.1-201ENST00000520765 532 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.46□□□□□ -2.18
PRKDCP78527 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 AP002967.1-201ENST00000624203 539 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PRKDCP78527 MTND5P3-201ENST00000438536 1800 ntBASIC1.46□□□□□ -2.18
PRKDCP78527 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.46□□□□□ -2.18
PRKDCP78527 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
PRKDCP78527 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.45□□□□□ -2.18
PRKDCP78527 IPMKP1-201ENST00000425988 855 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.45□□□□□ -2.18
PRKDCP78527 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.45□□□□□ -2.18
PRKDCP78527 AP003499.2-201ENST00000624100 483 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
PRKDCP78527 MAPK10-373ENST00000641983 6772 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 AC009487.2-201ENST00000420969 6821 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
PRKDCP78527 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-1-201ENST00000383898 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-42P-201ENST00000384165 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-36P-201ENST00000384172 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-4P-201ENST00000384205 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-5P-201ENST00000384238 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-3P-201ENST00000384314 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-2-201ENST00000384627 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-9-201ENST00000384776 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-33P-201ENST00000384793 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.45□□□□□ -2.18
PRKDCP78527 SNRPGP19-201ENST00000603826 189 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-6P-201ENST00000606623 107 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
PRKDCP78527 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PRKDCP78527 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.45□□□□□ -2.18
PRKDCP78527 TOMM22P6-201ENST00000465035 409 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RPS27P27-201ENST00000498779 255 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 AC008126.1-201ENST00000549019 480 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 LRRC37A5P-203ENST00000580181 585 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.45□□□□□ -2.18
PRKDCP78527 RNU6-53P-201ENST00000365367 106 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AC005005.2-201ENST00000420779 380 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AL356806.1-201ENST00000422524 916 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AC093151.1-201ENST00000427711 313 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AC108734.3-201ENST00000481241 1165 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AC006116.7-201ENST00000590141 756 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AL353748.2-201ENST00000622148 471 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
PRKDCP78527 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PRKDCP78527 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PRKDCP78527 SAR1AP2-201ENST00000392696 594 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AC013470.3-201ENST00000420252 1194 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.44□□□□□ -2.18
PRKDCP78527 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.44□□□□□ -2.18
PRKDCP78527 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.44□□□□□ -2.18
PRKDCP78527 PDCD5P1-201ENST00000543528 309 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 AP006248.2-201ENST00000623309 592 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PRKDCP78527 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PRKDCP78527 DHFRP5-201ENST00000406944 564 ntBASIC1.44□□□□□ -2.18
PRKDCP78527 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.44□□□□□ -2.18
PRKDCP78527 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PRKDCP78527 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms