Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 MIR892C-201ENST00000516410 77 ntBASIC1.55□□□□□ -2.16
RPS28P62857 SNORA70.17-201ENST00000516449 133 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPS28P62857 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AP003467.2-201ENST00000520175 319 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
RPS28P62857 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.55□□□□□ -2.16
RPS28P62857 AC011611.5-201ENST00000552477 578 ntBASIC1.55□□□□□ -2.16
RPS28P62857 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC1.55□□□□□ -2.16
RPS28P62857 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.55□□□□□ -2.16
RPS28P62857 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPS28P62857 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPS28P62857 HMGN2P15-201ENST00000585707 270 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AL355297.2-201ENST00000604792 129 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AC004908.2-201ENST00000609090 574 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AC109809.1-201ENST00000619665 545 ntBASIC1.55□□□□□ -2.16
RPS28P62857 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPS28P62857 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.55□□□□□ -2.16
RPS28P62857 AL049641.1-201ENST00000441055 1948 ntBASIC1.54□□□□□ -2.16
RPS28P62857 RNU6-234P-201ENST00000365229 104 ntBASIC1.54□□□□□ -2.16
RPS28P62857 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
RPS28P62857 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
RPS28P62857 RNU6-1083P-201ENST00000384022 107 ntBASIC1.54□□□□□ -2.16
RPS28P62857 MIR218-1-201ENST00000384999 110 ntBASIC1.54□□□□□ -2.16
RPS28P62857 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RPS28P62857 AL035419.1-201ENST00000397037 564 ntBASIC1.54□□□□□ -2.16
RPS28P62857 TMSB10P2-201ENST00000416049 131 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AC233981.1-201ENST00000423224 461 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.54□□□□□ -2.16
RPS28P62857 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC1.54□□□□□ -2.16
RPS28P62857 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.54□□□□□ -2.16
RPS28P62857 CYCSP32-201ENST00000440548 321 ntBASIC1.54□□□□□ -2.16
RPS28P62857 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC1.54□□□□□ -2.16
RPS28P62857 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.54□□□□□ -2.16
RPS28P62857 AL500527.1-201ENST00000448532 255 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC1.54□□□□□ -2.16
RPS28P62857 RPL21P134-201ENST00000453468 483 ntBASIC1.54□□□□□ -2.16
RPS28P62857 CDC42P1-201ENST00000456658 548 ntBASIC1.54□□□□□ -2.16
RPS28P62857 MTCO1P42-201ENST00000457379 726 ntBASIC1.54□□□□□ -2.16
RPS28P62857 RN7SL303P-201ENST00000469773 251 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AC107032.1-201ENST00000485945 480 ntBASIC1.54□□□□□ -2.16
RPS28P62857 MTCO2P9-201ENST00000503214 694 ntBASIC1.54□□□□□ -2.16
RPS28P62857 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.54□□□□□ -2.16
RPS28P62857 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.54□□□□□ -2.16
RPS28P62857 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.54□□□□□ -2.16
RPS28P62857 RNU6-1282P-201ENST00000516735 96 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.54□□□□□ -2.16
RPS28P62857 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RPS28P62857 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.54□□□□□ -2.16
RPS28P62857 GCSHP4-201ENST00000538792 439 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.54□□□□□ -2.16
RPS28P62857 OR11H5P-201ENST00000554039 926 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AC027104.1-201ENST00000563702 681 ntBASIC1.54□□□□□ -2.16
RPS28P62857 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
RPS28P62857 MIR3935-201ENST00000583472 104 ntBASIC1.54□□□□□ -2.16
RPS28P62857 VN1R85P-201ENST00000601587 426 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC1.54□□□□□ -2.16
RPS28P62857 AL445423.1-201ENST00000609941 536 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AC093799.2-201ENST00000610062 578 ntBASIC1.54□□□□□ -2.16
RPS28P62857 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC1.54□□□□□ -2.16
RPS28P62857 MIR6853-201ENST00000619642 74 ntBASIC1.54□□□□□ -2.16
RPS28P62857 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.54□□□□□ -2.16
RPS28P62857 AC091953.5-201ENST00000622919 233 ntBASIC1.54□□□□□ -2.16
RPS28P62857 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.54□□□□□ -2.16
RPS28P62857 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RPS28P62857 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.53□□□□□ -2.16
RPS28P62857 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPS28P62857 SNORD51-201ENST00000384320 80 ntBASIC1.53□□□□□ -2.16
RPS28P62857 RNU1-148P-201ENST00000384472 162 ntBASIC1.53□□□□□ -2.16
RPS28P62857 MIR191-201ENST00000384873 92 ntBASIC1.53□□□□□ -2.16
RPS28P62857 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RPS28P62857 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RPS28P62857 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPS28P62857 RAB9AP3-201ENST00000412737 573 ntBASIC1.53□□□□□ -2.16
RPS28P62857 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 HMGB1P49-201ENST00000418882 569 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 AL353689.1-201ENST00000438895 199 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.53□□□□□ -2.16
RPS28P62857 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.53□□□□□ -2.16
RPS28P62857 RAB9AP1-201ENST00000449393 573 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.53□□□□□ -2.16
RPS28P62857 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC1.53□□□□□ -2.16
RPS28P62857 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC1.53□□□□□ -2.16
RPS28P62857 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 MTCO1P31-201ENST00000506355 492 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.53□□□□□ -2.16
RPS28P62857 RN7SKP66-201ENST00000516681 231 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms