Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TRAV15-201ENST00000556680 249 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.16□□□□□ -1.9
LMO4P61968 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.16□□□□□ -1.9
LMO4P61968 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.16□□□□□ -1.9
LMO4P61968 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO4P61968 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.16□□□□□ -1.9
LMO4P61968 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.16□□□□□ -1.9
LMO4P61968 SEPT7P9-203ENST00000604116 343 ntBASIC3.16□□□□□ -1.9
LMO4P61968 LARP7P1-201ENST00000605576 316 ntBASIC3.16□□□□□ -1.9
LMO4P61968 RNU1-30P-201ENST00000606575 163 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AC107214.2-201ENST00000608204 634 ntBASIC3.16□□□□□ -1.9
LMO4P61968 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 AL359314.1-201ENST00000616913 261 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AC244100.1-202ENST00000621554 382 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AC067931.1-201ENST00000624190 671 ntBASIC3.16□□□□□ -1.9
LMO4P61968 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LMO4P61968 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LMO4P61968 AC009093.8-201ENST00000641769 292 ntBASIC3.16□□□□□ -1.9
LMO4P61968 OR5H6-203ENST00000642105 978 ntBASIC3.16□□□□□ -1.9
LMO4P61968 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO4P61968 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LMO4P61968 AC087190.4-201ENST00000574616 8334 ntBASIC3.15□□□□□ -1.9
LMO4P61968 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
LMO4P61968 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 RNU5F-6P-201ENST00000362979 116 ntBASIC3.15□□□□□ -1.91
LMO4P61968 RNU6-694P-201ENST00000364071 147 ntBASIC3.15□□□□□ -1.91
LMO4P61968 Y_RNA.303-201ENST00000364998 94 ntBASIC3.15□□□□□ -1.91
LMO4P61968 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 MTCYBP36-201ENST00000404146 440 ntBASIC3.15□□□□□ -1.91
LMO4P61968 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 AC093578.1-201ENST00000415219 368 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.15□□□□□ -1.91
LMO4P61968 BOLA3P4-201ENST00000418151 400 ntBASIC3.15□□□□□ -1.91
LMO4P61968 EIF4EP1-201ENST00000422311 642 ntBASIC3.15□□□□□ -1.91
LMO4P61968 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 AC005517.2-201ENST00000424673 553 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.15□□□□□ -1.91
LMO4P61968 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO4P61968 RPS17P13-201ENST00000448974 407 ntBASIC3.15□□□□□ -1.91
LMO4P61968 PDSS1P2-201ENST00000449397 678 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO4P61968 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.15□□□□□ -1.91
LMO4P61968 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.15□□□□□ -1.91
LMO4P61968 KLF3P2-201ENST00000465138 268 ntBASIC3.15□□□□□ -1.91
LMO4P61968 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO4P61968 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO4P61968 AC108941.1-201ENST00000502853 530 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO4P61968 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO4P61968 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 IGLVIV-53-201ENST00000520107 367 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO4P61968 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.15□□□□□ -1.91
LMO4P61968 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO4P61968 AC005771.1-201ENST00000585581 349 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC091135.1-201ENST00000585943 307 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC083760.1-201ENST00000589621 670 ntBASIC3.15□□□□□ -1.91
LMO4P61968 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.15□□□□□ -1.91
LMO4P61968 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO4P61968 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO4P61968 AC090970.3-201ENST00000612566 866 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC072046.2-201ENST00000618366 268 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC092650.2-201ENST00000619984 902 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC018816.2-201ENST00000621460 353 ntBASIC3.15□□□□□ -1.91
LMO4P61968 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
LMO4P61968 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO4P61968 AL356596.1-201ENST00000624230 379 ntBASIC3.15□□□□□ -1.91
LMO4P61968 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.15□□□□□ -1.91
LMO4P61968 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 AC073544.1-201ENST00000600110 1595 ntBASIC3.15□□□□□ -1.91
LMO4P61968 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 CDR1-202ENST00000625883 1485 ntBASIC3.15□□□□□ -1.91
LMO4P61968 AC117529.2-201ENST00000512159 2068 ntBASIC3.15□□□□□ -1.91
LMO4P61968 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMO4P61968 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 ZNF734P-201ENST00000419494 1534 ntBASIC3.14□□□□□ -1.91
LMO4P61968 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 MTND4P16-201ENST00000466108 1367 ntBASIC3.14□□□□□ -1.91
LMO4P61968 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LMO4P61968 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.14□□□□□ -1.91
LMO4P61968 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 MIR208A-201ENST00000362287 71 ntBASIC3.14□□□□□ -1.91
LMO4P61968 RN7SKP226-201ENST00000364912 300 ntBASIC3.14□□□□□ -1.91
LMO4P61968 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms