Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL590084.1-201ENST00000407885 387 ntBASIC3.36□□□□□ -1.87
SRP54P61011 YPEL5P1-201ENST00000419731 367 ntBASIC3.36□□□□□ -1.87
SRP54P61011 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP54P61011 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SRP54P61011 MTCO2P25-201ENST00000447065 681 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP54P61011 SSXP4-201ENST00000451349 245 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AC011979.1-201ENST00000472300 483 ntBASIC3.36□□□□□ -1.87
SRP54P61011 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SRP54P61011 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP54P61011 AC093278.1-201ENST00000494700 600 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AC021146.5-201ENST00000503544 545 ntBASIC3.36□□□□□ -1.87
SRP54P61011 COX7A2P2-201ENST00000505291 250 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP54P61011 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP54P61011 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SRP54P61011 AC006518.1-201ENST00000541449 943 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AL391156.1-201ENST00000554965 554 ntBASIC3.36□□□□□ -1.87
SRP54P61011 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP54P61011 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP54P61011 AL132657.2-201ENST00000564417 358 ntBASIC3.36□□□□□ -1.87
SRP54P61011 FAM60BP-201ENST00000578364 658 ntBASIC3.36□□□□□ -1.87
SRP54P61011 MIR3908-201ENST00000579798 126 ntBASIC3.36□□□□□ -1.87
SRP54P61011 MIR3200-201ENST00000580767 85 ntBASIC3.36□□□□□ -1.87
SRP54P61011 MAGOH2P-202ENST00000584384 429 ntBASIC3.36□□□□□ -1.87
SRP54P61011 BDH2P1-201ENST00000602288 736 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.36□□□□□ -1.87
SRP54P61011 AP001330.4-201ENST00000604350 154 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AC107294.3-201ENST00000609211 526 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AC022306.3-201ENST00000619930 550 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AC022509.4-201ENST00000621404 572 ntBASIC3.36□□□□□ -1.87
SRP54P61011 MIR3651-201ENST00000630427 90 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP54P61011 AL356274.2-201ENST00000624379 3752 ntBASIC3.36□□□□□ -1.87
SRP54P61011 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.36□□□□□ -1.87
SRP54P61011 AP002907.1-201ENST00000606361 1430 ntBASIC3.36□□□□□ -1.87
SRP54P61011 OR4G11P-202ENST00000642116 1414 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
SRP54P61011 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SRP54P61011 AC032011.1-201ENST00000611703 1549 ntBASIC3.35□□□□□ -1.87
SRP54P61011 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRP54P61011 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SRP54P61011 HMGB1P17-201ENST00000403495 628 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AL591034.1-201ENST00000407447 340 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AC068533.2-201ENST00000411872 306 ntBASIC3.35□□□□□ -1.87
SRP54P61011 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP54P61011 MTATP6P20-201ENST00000414147 562 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AC012498.1-201ENST00000424037 437 ntBASIC3.35□□□□□ -1.87
SRP54P61011 MTCO1P39-201ENST00000426148 480 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.35□□□□□ -1.87
SRP54P61011 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP54P61011 MUPP-201ENST00000438111 566 ntBASIC3.35□□□□□ -1.87
SRP54P61011 MTND4P6-201ENST00000438297 472 ntBASIC3.35□□□□□ -1.87
SRP54P61011 RABEPKP1-201ENST00000440529 1026 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AC091179.1-201ENST00000461606 579 ntBASIC3.35□□□□□ -1.87
SRP54P61011 RPL7P5-201ENST00000471472 736 ntBASIC3.35□□□□□ -1.87
SRP54P61011 TMEM251P1-201ENST00000503717 318 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AC114322.1-201ENST00000506771 926 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP54P61011 SNORA74D-201ENST00000516404 141 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.35□□□□□ -1.87
SRP54P61011 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP54P61011 AP006245.1-201ENST00000522549 120 ntBASIC3.35□□□□□ -1.87
SRP54P61011 OR5AP1P-201ENST00000529730 940 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP54P61011 AC010198.2-201ENST00000550612 259 ntBASIC3.35□□□□□ -1.87
SRP54P61011 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRP54P61011 MIR4276-201ENST00000584832 70 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP54P61011 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP54P61011 AL121652.1-201ENST00000608851 448 ntBASIC3.35□□□□□ -1.87
SRP54P61011 AF117829.1-206ENST00000621883 3802 ntBASIC3.35□□□□□ -1.87
SRP54P61011 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP54P61011 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SRP54P61011 AC099654.9-201ENST00000637055 678 ntBASIC3.35□□□□□ -1.87
SRP54P61011 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRP54P61011 AC093010.3-201ENST00000570269 15214 ntBASIC3.35□□□□□ -1.87
SRP54P61011 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.87
SRP54P61011 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.34□□□□□ -1.87
SRP54P61011 Z83843.1-201ENST00000604070 3685 ntBASIC3.34□□□□□ -1.87
SRP54P61011 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.87
SRP54P61011 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SRP54P61011 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SRP54P61011 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP54P61011 RPL7P26-201ENST00000333817 754 ntBASIC3.34□□□□□ -1.87
SRP54P61011 RNU6-560P-201ENST00000364007 108 ntBASIC3.34□□□□□ -1.87
SRP54P61011 SNORA38.1-201ENST00000364172 131 ntBASIC3.34□□□□□ -1.87
SRP54P61011 RNU6-173P-201ENST00000364215 104 ntBASIC3.34□□□□□ -1.87
SRP54P61011 RNU6-413P-201ENST00000384115 107 ntBASIC3.34□□□□□ -1.87
SRP54P61011 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SRP54P61011 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SRP54P61011 TAF9BP1-201ENST00000396646 746 ntBASIC3.34□□□□□ -1.87
SRP54P61011 RPS15AP38-201ENST00000413110 372 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP54P61011 MTATP6P27-201ENST00000416987 621 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AL354692.1-201ENST00000423044 315 ntBASIC3.34□□□□□ -1.87
SRP54P61011 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
SRP54P61011 AL590233.1-201ENST00000430017 456 ntBASIC3.34□□□□□ -1.87
SRP54P61011 HMGN2P20-201ENST00000437531 273 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AC004866.2-201ENST00000438285 481 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms