Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VSX2P58304 RABEPKP1-201ENST00000440529 1026 ntBASIC2.8□□□□□ -1.96
VSX2P58304 ELOCP13-201ENST00000443934 329 ntBASIC2.8□□□□□ -1.96
VSX2P58304 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.8□□□□□ -1.96
VSX2P58304 RPL37P4-201ENST00000448908 268 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AL162389.1-201ENST00000449233 177 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.8□□□□□ -1.96
VSX2P58304 AC083906.5-201ENST00000503722 328 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.8□□□□□ -1.96
VSX2P58304 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.8□□□□□ -1.96
VSX2P58304 HMGB1P1-201ENST00000522557 636 ntBASIC2.8□□□□□ -1.96
VSX2P58304 OR4R2P-201ENST00000530815 597 ntBASIC2.8□□□□□ -1.96
VSX2P58304 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.8□□□□□ -1.96
VSX2P58304 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.8□□□□□ -1.96
VSX2P58304 AC055876.1-202ENST00000567053 138 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.8□□□□□ -1.96
VSX2P58304 AC103881.1-201ENST00000603476 538 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AC002487.1-201ENST00000604565 994 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AL590282.1-201ENST00000610379 1136 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AC073968.1-201ENST00000618594 637 ntBASIC2.8□□□□□ -1.96
VSX2P58304 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.8□□□□□ -1.96
VSX2P58304 MTND2P41-201ENST00000637599 773 ntBASIC2.8□□□□□ -1.96
VSX2P58304 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
VSX2P58304 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VSX2P58304 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.79□□□□□ -1.96
VSX2P58304 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VSX2P58304 RNU6-115P-201ENST00000364310 107 ntBASIC2.79□□□□□ -1.96
VSX2P58304 SNORA9.2-201ENST00000365361 133 ntBASIC2.79□□□□□ -1.96
VSX2P58304 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
VSX2P58304 EIF5P1-201ENST00000400019 1231 ntBASIC2.79□□□□□ -1.96
VSX2P58304 MTCO2P31-201ENST00000402702 684 ntBASIC2.79□□□□□ -1.96
VSX2P58304 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.79□□□□□ -1.96
VSX2P58304 RPL7P8-201ENST00000411964 730 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.79□□□□□ -1.96
VSX2P58304 AC079780.1-201ENST00000428259 207 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AC104332.2-201ENST00000429959 156 ntBASIC2.79□□□□□ -1.96
VSX2P58304 UBE2V1P6-201ENST00000430840 422 ntBASIC2.79□□□□□ -1.96
VSX2P58304 YWHAZP7-201ENST00000436906 631 ntBASIC2.79□□□□□ -1.96
VSX2P58304 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VSX2P58304 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.79□□□□□ -1.96
VSX2P58304 NECAP1P2-201ENST00000455668 727 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AC097462.2-201ENST00000504623 481 ntBASIC2.79□□□□□ -1.96
VSX2P58304 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VSX2P58304 AC111000.2-201ENST00000507775 550 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VSX2P58304 SNORD59.2-201ENST00000516873 68 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.79□□□□□ -1.96
VSX2P58304 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.79□□□□□ -1.96
VSX2P58304 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VSX2P58304 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.79□□□□□ -1.96
VSX2P58304 AP003385.6-201ENST00000531603 374 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.79□□□□□ -1.96
VSX2P58304 AC107016.2-201ENST00000547968 190 ntBASIC2.79□□□□□ -1.96
VSX2P58304 CYB5AP5-201ENST00000549779 389 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AL157394.1-201ENST00000562983 1224 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.79□□□□□ -1.96
VSX2P58304 AC090330.1-201ENST00000588646 764 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AP005137.2-201ENST00000609238 400 ntBASIC2.79□□□□□ -1.96
VSX2P58304 VN1R74P-201ENST00000613259 503 ntBASIC2.79□□□□□ -1.96
VSX2P58304 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VSX2P58304 AC040168.1-201ENST00000623594 991 ntBASIC2.79□□□□□ -1.96
VSX2P58304 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.79□□□□□ -1.96
VSX2P58304 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.79□□□□□ -1.96
VSX2P58304 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VSX2P58304 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.79□□□□□ -1.96
VSX2P58304 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VSX2P58304 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.79□□□□□ -1.96
VSX2P58304 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.79□□□□□ -1.96
VSX2P58304 MAPK10-322ENST00000641485 4530 ntBASIC2.79□□□□□ -1.96
VSX2P58304 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.79□□□□□ -1.96
VSX2P58304 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VSX2P58304 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VSX2P58304 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.78□□□□□ -1.96
VSX2P58304 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.78□□□□□ -1.96
VSX2P58304 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
VSX2P58304 SNORA80A-201ENST00000363922 136 ntBASIC2.78□□□□□ -1.96
VSX2P58304 U8.9-201ENST00000365667 134 ntBASIC2.78□□□□□ -1.96
VSX2P58304 RNU6-468P-201ENST00000384003 109 ntBASIC2.78□□□□□ -1.96
VSX2P58304 MIR217-201ENST00000384817 110 ntBASIC2.78□□□□□ -1.96
VSX2P58304 MIR887-201ENST00000401258 79 ntBASIC2.78□□□□□ -1.96
VSX2P58304 U3.42-201ENST00000408746 214 ntBASIC2.78□□□□□ -1.96
VSX2P58304 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.78□□□□□ -1.96
VSX2P58304 RAD23BP2-201ENST00000416003 1207 ntBASIC2.78□□□□□ -1.96
VSX2P58304 MRPL50P2-201ENST00000416821 482 ntBASIC2.78□□□□□ -1.96
VSX2P58304 DUTP6-201ENST00000425573 462 ntBASIC2.78□□□□□ -1.96
VSX2P58304 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.78□□□□□ -1.96
VSX2P58304 MTCYBP32-201ENST00000427945 1084 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AL139132.1-201ENST00000431587 344 ntBASIC2.78□□□□□ -1.96
VSX2P58304 RPS20P5-201ENST00000434808 360 ntBASIC2.78□□□□□ -1.96
VSX2P58304 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.78□□□□□ -1.96
VSX2P58304 AC093801.2-201ENST00000503966 1050 ntBASIC2.78□□□□□ -1.96
VSX2P58304 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VSX2P58304 MTCO3P27-201ENST00000514397 196 ntBASIC2.78□□□□□ -1.96
VSX2P58304 RNU5A-7P-201ENST00000515979 116 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AP003355.1-201ENST00000518956 587 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AC090136.1-201ENST00000520009 240 ntBASIC2.78□□□□□ -1.96
VSX2P58304 FAM60DP-201ENST00000524174 632 ntBASIC2.78□□□□□ -1.96
VSX2P58304 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.78□□□□□ -1.96
VSX2P58304 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.78□□□□□ -1.96
VSX2P58304 AC126177.3-201ENST00000551839 688 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms