Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN20P56880 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN20P56880 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN20P56880 AC120057.2-201ENST00000571520 271 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 AC022916.3-201ENST00000592961 742 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN20P56880 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN20P56880 AL606490.9-201ENST00000603331 271 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 AC104662.1-201ENST00000604448 511 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CLDN20P56880 CRYM-AS1-204ENST00000637983 556 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CLDN20P56880 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CLDN20P56880 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN20P56880 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN20P56880 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN20P56880 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN20P56880 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN20P56880 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN20P56880 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 Y_RNA.126-201ENST00000363382 111 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 Y_RNA.194-201ENST00000363985 102 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 RN7SKP280-201ENST00000364196 304 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 RNU6-853P-201ENST00000364306 107 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 RNU6-359P-201ENST00000365466 108 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 RN7SKP177-201ENST00000410567 355 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 RPL36AP36-201ENST00000418616 301 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AL513174.1-201ENST00000423182 629 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 FTH1P6-201ENST00000430768 320 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN20P56880 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC091862.1-201ENST00000438016 1100 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN20P56880 MTCO1P19-201ENST00000443487 500 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.59□□□□□ -1.83
CLDN20P56880 AL500522.2-201ENST00000448562 343 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 MTCO3P20-201ENST00000454926 688 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 DNAJC19P1-201ENST00000455312 319 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN20P56880 FTH1P2-201ENST00000466086 412 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 ST13P14-201ENST00000474095 734 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 VN1R105P-201ENST00000486595 910 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC010460.1-201ENST00000507087 466 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 CBX3P3-201ENST00000508108 532 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 MTND3P5-201ENST00000512798 333 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 FABP5P5-201ENST00000515537 406 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 Y_RNA.655-201ENST00000515919 96 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN20P56880 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 MTND4LP18-201ENST00000526864 291 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC091516.1-201ENST00000549191 703 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 GNRHR2P1-201ENST00000555315 631 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC006362.1-201ENST00000567392 174 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN20P56880 MIR4286-201ENST00000580651 93 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC053481.4-201ENST00000583164 216 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 MIR548AB-201ENST00000584917 84 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 TPMTP1-201ENST00000592307 737 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC022146.1-201ENST00000595307 847 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC055876.5-201ENST00000605667 259 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 AC091965.4-201ENST00000607691 587 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 HULC.1-201ENST00000612720 240 ntBASIC3.59□□□□□ -1.83
CLDN20P56880 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN20P56880 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN20P56880 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN20P56880 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN20P56880 AP002001.2-201ENST00000529025 1469 ntBASIC3.59□□□□□ -1.84
CLDN20P56880 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CLDN20P56880 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN20P56880 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CLDN20P56880 TNPO1P3-201ENST00000436471 2662 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN20P56880 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN20P56880 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
CLDN20P56880 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN20P56880 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN20P56880 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN20P56880 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN20P56880 RNU6-97P-201ENST00000363387 104 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms