Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AP001189.2-201ENST00000527320 189 ntBASIC3.43□□□□□ -1.86
PEX3P56589 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.43□□□□□ -1.86
PEX3P56589 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.43□□□□□ -1.86
PEX3P56589 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.43□□□□□ -1.86
PEX3P56589 HIGD1AP17-201ENST00000554576 276 ntBASIC3.43□□□□□ -1.86
PEX3P56589 MIR3200-201ENST00000580767 85 ntBASIC3.43□□□□□ -1.86
PEX3P56589 BNIP3P26-201ENST00000600827 554 ntBASIC3.43□□□□□ -1.86
PEX3P56589 AC234772.3-201ENST00000602277 528 ntBASIC3.43□□□□□ -1.86
PEX3P56589 YWHAQP7-201ENST00000603536 658 ntBASIC3.43□□□□□ -1.86
PEX3P56589 AP001521.1-201ENST00000609150 300 ntBASIC3.43□□□□□ -1.86
PEX3P56589 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.43□□□□□ -1.86
PEX3P56589 AC013470.4-201ENST00000619978 986 ntBASIC3.43□□□□□ -1.86
PEX3P56589 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.43□□□□□ -1.86
PEX3P56589 AC022509.4-201ENST00000621404 572 ntBASIC3.43□□□□□ -1.86
PEX3P56589 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.43□□□□□ -1.86
PEX3P56589 AC120349.2-201ENST00000625002 298 ntBASIC3.43□□□□□ -1.86
PEX3P56589 SNORA50A-202ENST00000629536 136 ntBASIC3.43□□□□□ -1.86
PEX3P56589 MIR7153-201ENST00000637758 57 ntBASIC3.43□□□□□ -1.86
PEX3P56589 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PEX3P56589 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PEX3P56589 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PEX3P56589 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
PEX3P56589 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.43□□□□□ -1.86
PEX3P56589 AL079305.1-201ENST00000623159 3008 ntBASIC3.43□□□□□ -1.86
PEX3P56589 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PEX3P56589 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PEX3P56589 GABPAP-201ENST00000419271 1356 ntBASIC3.42□□□□□ -1.86
PEX3P56589 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.42□□□□□ -1.86
PEX3P56589 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PEX3P56589 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PEX3P56589 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
PEX3P56589 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PEX3P56589 RNU6-216P-201ENST00000363282 104 ntBASIC3.42□□□□□ -1.86
PEX3P56589 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.42□□□□□ -1.86
PEX3P56589 RNA5SP293-201ENST00000410527 113 ntBASIC3.42□□□□□ -1.86
PEX3P56589 RNU2-42P-201ENST00000410697 113 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC073264.1-201ENST00000411508 416 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.42□□□□□ -1.86
PEX3P56589 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
PEX3P56589 HMGB1P49-201ENST00000418882 569 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC245291.1-201ENST00000419501 328 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC127537.2-201ENST00000439258 465 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.42□□□□□ -1.86
PEX3P56589 RPL23AP16-201ENST00000441715 421 ntBASIC3.42□□□□□ -1.86
PEX3P56589 MTCO2P25-201ENST00000447065 681 ntBASIC3.42□□□□□ -1.86
PEX3P56589 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.42□□□□□ -1.86
PEX3P56589 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.42□□□□□ -1.86
PEX3P56589 AC021146.8-201ENST00000507455 733 ntBASIC3.42□□□□□ -1.86
PEX3P56589 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PEX3P56589 PTGES3P3-201ENST00000511479 482 ntBASIC3.42□□□□□ -1.86
PEX3P56589 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.42□□□□□ -1.86
PEX3P56589 AC112673.1-201ENST00000513168 575 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC010265.1-201ENST00000513509 211 ntBASIC3.42□□□□□ -1.86
PEX3P56589 MTCO1P30-201ENST00000515244 580 ntBASIC3.42□□□□□ -1.86
PEX3P56589 Y_RNA.717-201ENST00000517106 92 ntBASIC3.42□□□□□ -1.86
PEX3P56589 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.42□□□□□ -1.86
PEX3P56589 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PEX3P56589 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.42□□□□□ -1.86
PEX3P56589 AL132657.2-201ENST00000564417 358 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.42□□□□□ -1.86
PEX3P56589 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.42□□□□□ -1.86
PEX3P56589 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.42□□□□□ -1.86
PEX3P56589 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.42□□□□□ -1.86
PEX3P56589 AC069304.2-201ENST00000605154 435 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC092954.1-201ENST00000609121 445 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC099778.2-201ENST00000610904 211 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC005332.6-201ENST00000613178 446 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC079395.3-201ENST00000615161 484 ntBASIC3.42□□□□□ -1.86
PEX3P56589 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.42□□□□□ -1.86
PEX3P56589 MIR622-201ENST00000638396 96 ntBASIC3.42□□□□□ -1.86
PEX3P56589 AC006927.4-201ENST00000639187 543 ntBASIC3.42□□□□□ -1.86
PEX3P56589 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.42□□□□□ -1.86
PEX3P56589 AC107982.1-201ENST00000507171 1300 ntBASIC3.42□□□□□ -1.86
PEX3P56589 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PEX3P56589 PABPC1P7-201ENST00000413177 1513 ntBASIC3.41□□□□□ -1.86
PEX3P56589 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PEX3P56589 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PEX3P56589 SNORD113-6-201ENST00000363345 75 ntBASIC3.41□□□□□ -1.86
PEX3P56589 MIR153-1-201ENST00000384914 90 ntBASIC3.41□□□□□ -1.86
PEX3P56589 SSXP10-201ENST00000402595 565 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AL133384.1-201ENST00000412744 351 ntBASIC3.41□□□□□ -1.86
PEX3P56589 RPS24P7-201ENST00000416921 246 ntBASIC3.41□□□□□ -1.86
PEX3P56589 RPL31P45-201ENST00000419532 356 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.41□□□□□ -1.86
PEX3P56589 ELOCP13-201ENST00000443934 329 ntBASIC3.41□□□□□ -1.86
PEX3P56589 MTCO1P48-201ENST00000448024 1096 ntBASIC3.41□□□□□ -1.86
PEX3P56589 RPL29P29-201ENST00000448725 423 ntBASIC3.41□□□□□ -1.86
PEX3P56589 SLC31A1P1-201ENST00000451221 567 ntBASIC3.41□□□□□ -1.86
PEX3P56589 TRGVB-201ENST00000453257 471 ntBASIC3.41□□□□□ -1.86
PEX3P56589 RPL21P134-201ENST00000453468 483 ntBASIC3.41□□□□□ -1.86
PEX3P56589 TRBV26-201ENST00000456572 344 ntBASIC3.41□□□□□ -1.86
PEX3P56589 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.41□□□□□ -1.86
PEX3P56589 AL136126.1-201ENST00000473603 402 ntBASIC3.41□□□□□ -1.86
PEX3P56589 ST13P14-201ENST00000474095 734 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.41□□□□□ -1.86
PEX3P56589 AC079395.1-201ENST00000510981 262 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AC008885.1-201ENST00000514930 301 ntBASIC3.41□□□□□ -1.86
PEX3P56589 Vault.1-201ENST00000516474 102 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.41□□□□□ -1.86
PEX3P56589 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms