Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC079781.2-201ENST00000446424 169 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 AC003071.1-201ENST00000451219 789 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.12□□□□□ -1.75
SUMO3P55854 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.12□□□□□ -1.75
SUMO3P55854 RNA5SP497-201ENST00000516081 97 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 RNU6-1220P-201ENST00000517126 108 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SUMO3P55854 RPL21P7-201ENST00000557463 483 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 RPL21P12-201ENST00000559810 515 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 FAM60BP-201ENST00000578364 658 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.12□□□□□ -1.75
SUMO3P55854 AC012507.3-201ENST00000603556 477 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.12□□□□□ -1.75
SUMO3P55854 AP005019.3-201ENST00000620418 560 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.12□□□□□ -1.75
SUMO3P55854 AC244100.1-202ENST00000621554 382 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.12□□□□□ -1.75
SUMO3P55854 AC006065.6-201ENST00000625201 545 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.12□□□□□ -1.75
SUMO3P55854 LINC01355-201ENST00000566551 5444 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 AC139769.1-204ENST00000472297 1931 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SUMO3P55854 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.12□□□□□ -1.75
SUMO3P55854 AL133412.1-201ENST00000380194 2992 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 AC009812.4-201ENST00000569134 1805 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 AP001350.1-201ENST00000601906 1524 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC092435.4-201ENST00000623012 4159 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 Y_RNA.9-201ENST00000362354 101 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 RNU6-173P-201ENST00000364215 104 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 SNORA23-201ENST00000365128 182 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 RNU6-76P-201ENST00000384060 104 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 MIR192-201ENST00000384915 110 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AL136372.1-201ENST00000403060 228 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AL590002.1-201ENST00000406554 418 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.11□□□□□ -1.75
SUMO3P55854 RPS12P10-201ENST00000427031 377 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 RPL23AP93-201ENST00000440847 484 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 RPL23AP20-201ENST00000447965 421 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 Z99127.3-201ENST00000448158 395 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AC006480.1-201ENST00000449887 378 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC022364.2-201ENST00000457963 554 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC013267.1-201ENST00000458227 267 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC007537.2-201ENST00000472093 511 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 RPS29P22-201ENST00000472363 168 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.11□□□□□ -1.75
SUMO3P55854 VN1R104P-201ENST00000505115 1009 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC090151.1-201ENST00000520784 730 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.11□□□□□ -1.75
SUMO3P55854 FAM60DP-201ENST00000524174 632 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 AP001781.1-201ENST00000530977 207 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AC105233.3-201ENST00000531125 744 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC006270.2-201ENST00000578523 652 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 ELOCP28-201ENST00000590044 317 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 GLUD1P4-201ENST00000590914 418 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 AC004067.1-201ENST00000608733 700 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 AC019193.2-201ENST00000610012 634 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 SNHG22-203ENST00000617833 660 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 AL360181.4-201ENST00000621752 134 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 FRG1KP-201ENST00000623592 341 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SUMO3P55854 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms