Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH11P55287 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH11P55287 NANOGP10-201ENST00000453325 895 ntBASIC3.48□□□□□ -1.85
CDH11P55287 MTCO2P18-201ENST00000457151 658 ntBASIC3.48□□□□□ -1.85
CDH11P55287 MTND4LP3-201ENST00000468320 276 ntBASIC3.48□□□□□ -1.85
CDH11P55287 HMGB1P25-201ENST00000468402 607 ntBASIC3.48□□□□□ -1.85
CDH11P55287 RPL7P47-201ENST00000497299 556 ntBASIC3.48□□□□□ -1.85
CDH11P55287 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH11P55287 POU5F1P7-201ENST00000508759 541 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AC024589.1-201ENST00000512207 263 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH11P55287 AC093677.1-201ENST00000514414 678 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AC087369.1-201ENST00000520775 996 ntBASIC3.48□□□□□ -1.85
CDH11P55287 OR5AP1P-201ENST00000529730 940 ntBASIC3.48□□□□□ -1.85
CDH11P55287 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.48□□□□□ -1.85
CDH11P55287 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH11P55287 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH11P55287 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.48□□□□□ -1.85
CDH11P55287 PCMTD1P2-201ENST00000565017 355 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AC091489.2-201ENST00000566263 604 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH11P55287 MIR5685-201ENST00000579080 79 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 MIR544B-201ENST00000582372 78 ntBASIC3.48□□□□□ -1.85
CDH11P55287 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH11P55287 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 AL049634.3-201ENST00000604968 457 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AC245389.1-201ENST00000605141 529 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AL451086.1-201ENST00000605596 223 ntBASIC3.48□□□□□ -1.85
CDH11P55287 AL158063.1-201ENST00000615349 536 ntBASIC3.48□□□□□ -1.85
CDH11P55287 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CDH11P55287 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH11P55287 PABPC1P9-201ENST00000426076 1612 ntBASIC3.48□□□□□ -1.85
CDH11P55287 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH11P55287 RPS4XP5-202ENST00000449995 1334 ntBASIC3.47□□□□□ -1.85
CDH11P55287 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH11P55287 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 AL390237.1-201ENST00000404226 1415 ntBASIC3.47□□□□□ -1.85
CDH11P55287 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 Y_RNA.51-201ENST00000362725 102 ntBASIC3.47□□□□□ -1.85
CDH11P55287 RNU6-501P-201ENST00000364072 100 ntBASIC3.47□□□□□ -1.85
CDH11P55287 Y_RNA.318-201ENST00000365131 97 ntBASIC3.47□□□□□ -1.85
CDH11P55287 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH11P55287 RNU6-356P-201ENST00000384140 107 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AL355379.1-201ENST00000405542 640 ntBASIC3.47□□□□□ -1.85
CDH11P55287 RN7SKP159-201ENST00000410657 292 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH11P55287 MED14P1-201ENST00000430517 648 ntBASIC3.47□□□□□ -1.85
CDH11P55287 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH11P55287 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH11P55287 MTCO2P16-201ENST00000436962 677 ntBASIC3.47□□□□□ -1.85
CDH11P55287 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH11P55287 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 RPL36AP33-201ENST00000450395 310 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH11P55287 RNU7-170P-201ENST00000459303 61 ntBASIC3.47□□□□□ -1.85
CDH11P55287 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH11P55287 SLC25A15P5-201ENST00000508033 253 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AC021146.1-201ENST00000511202 716 ntBASIC3.47□□□□□ -1.85
CDH11P55287 MTND5P13-201ENST00000513046 1079 ntBASIC3.47□□□□□ -1.85
CDH11P55287 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH11P55287 RNU6-27P-201ENST00000516146 107 ntBASIC3.47□□□□□ -1.85
CDH11P55287 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH11P55287 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 AP004247.1-201ENST00000531556 1289 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AC068587.4-201ENST00000533893 186 ntBASIC3.47□□□□□ -1.85
CDH11P55287 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH11P55287 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CDH11P55287 AC023161.2-201ENST00000551218 780 ntBASIC3.47□□□□□ -1.85
CDH11P55287 HSPE1P5-201ENST00000561489 272 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH11P55287 AC053481.3-201ENST00000577881 843 ntBASIC3.47□□□□□ -1.85
CDH11P55287 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH11P55287 AL669831.4-202ENST00000590817 238 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH11P55287 MIR92B-201ENST00000607575 96 ntBASIC3.47□□□□□ -1.85
CDH11P55287 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 AC073114.1-201ENST00000612027 490 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AL391261.4-201ENST00000616012 481 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AL596245.1-201ENST00000618994 362 ntBASIC3.47□□□□□ -1.85
CDH11P55287 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 AC091925.2-201ENST00000625059 256 ntBASIC3.47□□□□□ -1.85
CDH11P55287 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH11P55287 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH11P55287 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CDH11P55287 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH11P55287 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH11P55287 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.46□□□□□ -1.85
CDH11P55287 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH11P55287 AC006378.2-201ENST00000623178 2476 ntBASIC3.46□□□□□ -1.86
CDH11P55287 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms