Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RNU1-6P-201ENST00000516290 144 ntBASIC5.15□□□□□ -1.59
PMS1P54277 RN7SKP277-201ENST00000516895 283 ntBASIC5.15□□□□□ -1.59
PMS1P54277 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.15□□□□□ -1.59
PMS1P54277 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PMS1P54277 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.15□□□□□ -1.59
PMS1P54277 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.15□□□□□ -1.59
PMS1P54277 AL121821.2-201ENST00000556081 394 ntBASIC5.15□□□□□ -1.59
PMS1P54277 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
PMS1P54277 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.15□□□□□ -1.59
PMS1P54277 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.15□□□□□ -1.59
PMS1P54277 MIR6719-201ENST00000622428 87 ntBASIC5.15□□□□□ -1.59
PMS1P54277 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.15□□□□□ -1.59
PMS1P54277 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.15□□□□□ -1.59
PMS1P54277 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PMS1P54277 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
PMS1P54277 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PMS1P54277 AL645937.1-201ENST00000641739 1652 ntBASIC5.15□□□□□ -1.59
PMS1P54277 NXPH1-205ENST00000602349 1953 ntBASIC5.15□□□□□ -1.59
PMS1P54277 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.14□□□□□ -1.59
PMS1P54277 MAPK10-304ENST00000641341 3984 ntBASIC5.14□□□□□ -1.59
PMS1P54277 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 SNORA62.1-201ENST00000364287 154 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RNU6-1078P-201ENST00000364522 103 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RNA5SP151-201ENST00000365632 117 ntBASIC5.14□□□□□ -1.59
PMS1P54277 Y_RNA.419-201ENST00000384041 102 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RNU6-193P-201ENST00000410977 107 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RNU6-1148P-201ENST00000410992 104 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RN7SKP167-201ENST00000411047 285 ntBASIC5.14□□□□□ -1.59
PMS1P54277 ERLEC1P1-201ENST00000433806 578 ntBASIC5.14□□□□□ -1.59
PMS1P54277 MTATP6P16-201ENST00000434543 526 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 RPS29P15-201ENST00000458329 171 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RNU7-182P-201ENST00000459009 62 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AC126389.1-201ENST00000477436 290 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AC116562.3-201ENST00000506136 177 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AC004062.1-201ENST00000509926 645 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RNA5SP446-201ENST00000515955 82 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RNU4-49P-201ENST00000516080 140 ntBASIC5.14□□□□□ -1.59
PMS1P54277 RN7SKP82-201ENST00000516786 223 ntBASIC5.14□□□□□ -1.59
PMS1P54277 HMGB1P41-201ENST00000520234 440 ntBASIC5.14□□□□□ -1.59
PMS1P54277 SUMO2P20-201ENST00000520803 283 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AC068587.5-201ENST00000528506 175 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.14□□□□□ -1.59
PMS1P54277 AL133271.1-201ENST00000538229 291 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.14□□□□□ -1.59
PMS1P54277 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.14□□□□□ -1.59
PMS1P54277 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.14□□□□□ -1.59
PMS1P54277 MTCO3P13-201ENST00000577757 781 ntBASIC5.14□□□□□ -1.59
PMS1P54277 MIR4742-201ENST00000581069 85 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AC011487.3-201ENST00000593607 453 ntBASIC5.14□□□□□ -1.59
PMS1P54277 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.14□□□□□ -1.59
PMS1P54277 SNORD91B-202ENST00000608459 222 ntBASIC5.14□□□□□ -1.59
PMS1P54277 SDR42E1P1-201ENST00000611327 477 ntBASIC5.14□□□□□ -1.59
PMS1P54277 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 IQCB2P-201ENST00000401788 1633 ntBASIC5.14□□□□□ -1.59
PMS1P54277 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PMS1P54277 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 AC104260.2-201ENST00000623551 3497 ntBASIC5.14□□□□□ -1.59
PMS1P54277 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PMS1P54277 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PMS1P54277 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.13□□□□□ -1.59
PMS1P54277 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PMS1P54277 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PMS1P54277 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PMS1P54277 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PMS1P54277 SNORD51-201ENST00000384320 80 ntBASIC5.13□□□□□ -1.59
PMS1P54277 RNU6-692P-201ENST00000384496 107 ntBASIC5.13□□□□□ -1.59
PMS1P54277 RNU4-26P-201ENST00000410270 107 ntBASIC5.13□□□□□ -1.59
PMS1P54277 RNA5SP113-201ENST00000410486 84 ntBASIC5.13□□□□□ -1.59
PMS1P54277 Y_RNA.615-201ENST00000410769 117 ntBASIC5.13□□□□□ -1.59
PMS1P54277 AL591848.1-201ENST00000413092 322 ntBASIC5.13□□□□□ -1.59
PMS1P54277 COX6B1P1-201ENST00000415962 213 ntBASIC5.13□□□□□ -1.59
PMS1P54277 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.13□□□□□ -1.59
PMS1P54277 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.13□□□□□ -1.59
PMS1P54277 RPS12P5-201ENST00000423449 371 ntBASIC5.13□□□□□ -1.59
PMS1P54277 MTCO2P12-201ENST00000427426 682 ntBASIC5.13□□□□□ -1.59
PMS1P54277 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.13□□□□□ -1.59
PMS1P54277 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
PMS1P54277 SAR1AP4-201ENST00000429225 591 ntBASIC5.13□□□□□ -1.59
PMS1P54277 AC018644.1-201ENST00000429934 551 ntBASIC5.13□□□□□ -1.59
PMS1P54277 HMGB3P9-201ENST00000441799 583 ntBASIC5.13□□□□□ -1.59
PMS1P54277 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.13□□□□□ -1.59
PMS1P54277 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.13□□□□□ -1.59
PMS1P54277 IGLV2-34-201ENST00000490007 283 ntBASIC5.13□□□□□ -1.59
PMS1P54277 DEFB109F-201ENST00000491870 277 ntBASIC5.13□□□□□ -1.59
PMS1P54277 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.13□□□□□ -1.59
PMS1P54277 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.13□□□□□ -1.59
PMS1P54277 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms