Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLTCL1P53675 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.78□□□□□ -1.96
CLTCL1P53675 AC068790.3-201ENST00000602988 553 ntBASIC2.78□□□□□ -1.96
CLTCL1P53675 AP003117.2-201ENST00000606010 545 ntBASIC2.78□□□□□ -1.96
CLTCL1P53675 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.78□□□□□ -1.96
CLTCL1P53675 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLTCL1P53675 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLTCL1P53675 AC005539.1-201ENST00000443768 1479 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 AP001148.1-201ENST00000624124 2359 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 Y_RNA.269-201ENST00000364685 89 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 RNA5SP160-201ENST00000364866 120 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 RNU2-22P-201ENST00000411266 212 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.77□□□□□ -1.97
CLTCL1P53675 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.77□□□□□ -1.97
CLTCL1P53675 AC087385.1-201ENST00000475062 312 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 ISCA1P3-201ENST00000577104 373 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 snoU13.31-201ENST00000607291 104 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLTCL1P53675 AP005901.5-201ENST00000545779 1796 ntBASIC2.77□□□□□ -1.97
CLTCL1P53675 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
CLTCL1P53675 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLTCL1P53675 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLTCL1P53675 AC233279.1-201ENST00000455300 423 ntBASIC2.76□□□□□ -1.97
CLTCL1P53675 AC017007.3-201ENST00000479865 435 ntBASIC2.76□□□□□ -1.97
CLTCL1P53675 AC006483.1-201ENST00000487308 313 ntBASIC2.76□□□□□ -1.97
CLTCL1P53675 AC090543.1-201ENST00000492168 485 ntBASIC2.76□□□□□ -1.97
CLTCL1P53675 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.76□□□□□ -1.97
CLTCL1P53675 RPS27AP18-201ENST00000515536 459 ntBASIC2.76□□□□□ -1.97
CLTCL1P53675 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.76□□□□□ -1.97
CLTCL1P53675 PSMA6P4-201ENST00000603247 718 ntBASIC2.76□□□□□ -1.97
CLTCL1P53675 VIS1.1-201ENST00000610517 203 ntBASIC2.76□□□□□ -1.97
CLTCL1P53675 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.76□□□□□ -1.97
CLTCL1P53675 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.76□□□□□ -1.97
CLTCL1P53675 VTRNA1-1-201ENST00000363120 99 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 SNORA40.18-201ENST00000391200 128 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 RNA5SP338-201ENST00000410495 85 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.75□□□□□ -1.97
CLTCL1P53675 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLTCL1P53675 AC009237.8-201ENST00000445492 379 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
CLTCL1P53675 MIR4255-201ENST00000579351 72 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 MIR4781-201ENST00000585250 76 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 RPAP2P1-201ENST00000603626 1168 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 AC128687.1-201ENST00000605304 619 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.75□□□□□ -1.97
CLTCL1P53675 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CLTCL1P53675 TRAV11-201ENST00000539512 339 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 RPS3AP23-202ENST00000574601 686 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 AC084768.2-201ENST00000622736 221 ntBASIC2.75□□□□□ -1.97
CLTCL1P53675 AP001486.2-201ENST00000561652 5113 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 AC092638.1-201ENST00000411966 1275 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 USP9YP27-201ENST00000418455 438 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.74□□□□□ -1.97
CLTCL1P53675 OR4K11P-201ENST00000431829 904 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.74□□□□□ -1.97
CLTCL1P53675 RPL23AP20-201ENST00000447965 421 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 PTGES3P5-201ENST00000455109 434 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 RPL23AP63-201ENST00000498752 471 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 SNORA31.11-201ENST00000516528 139 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 AC007687.1-201ENST00000602704 304 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 AC016590.3-201ENST00000611171 753 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 AC108479.2-201ENST00000617314 601 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 AC002064.3-201ENST00000623448 346 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.74□□□□□ -1.97
CLTCL1P53675 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLTCL1P53675 AL353746.1-201ENST00000566293 6881 ntBASIC2.74□□□□□ -1.97
CLTCL1P53675 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLTCL1P53675 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLTCL1P53675 AL627390.1-201ENST00000396055 340 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 AL450338.1-201ENST00000407987 512 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 LUZP4P1-201ENST00000415420 344 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.73□□□□□ -1.97
CLTCL1P53675 RNU6-717P-201ENST00000459076 104 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 RNU6-1053P-201ENST00000515930 101 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 AC011611.5-201ENST00000552477 578 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.73□□□□□ -1.97
CLTCL1P53675 AC103810.1-201ENST00000579873 453 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 AC009314.1-201ENST00000603871 304 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 AL121594.5-201ENST00000631724 573 ntBASIC2.73□□□□□ -1.97
CLTCL1P53675 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLTCL1P53675 AC048351.1-201ENST00000420064 602 ntBASIC2.72□□□□□ -1.97
CLTCL1P53675 FNDC3CP-201ENST00000420795 1155 ntBASIC2.72□□□□□ -1.97
CLTCL1P53675 AC009414.1-201ENST00000427200 443 ntBASIC2.72□□□□□ -1.97
CLTCL1P53675 TMEM248P1-201ENST00000510579 951 ntBASIC2.72□□□□□ -1.97
CLTCL1P53675 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
CLTCL1P53675 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.72□□□□□ -1.97
CLTCL1P53675 AC009570.1-201ENST00000609599 745 ntBASIC2.72□□□□□ -1.97
CLTCL1P53675 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.71□□□□□ -1.97
CLTCL1P53675 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
CLTCL1P53675 Y_RNA.466-201ENST00000384294 113 ntBASIC2.71□□□□□ -1.97
CLTCL1P53675 NEK4P1-201ENST00000433383 879 ntBASIC2.71□□□□□ -1.97
CLTCL1P53675 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.71□□□□□ -1.97
CLTCL1P53675 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.71□□□□□ -1.97
CLTCL1P53675 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.71□□□□□ -1.97
CLTCL1P53675 OR4U1P-201ENST00000554958 912 ntBASIC2.71□□□□□ -1.97
CLTCL1P53675 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.71□□□□□ -1.97
CLTCL1P53675 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.71□□□□□ -1.97
CLTCL1P53675 AC000367.1-201ENST00000452711 1766 ntBASIC2.71□□□□□ -1.98
CLTCL1P53675 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms