Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.03□□□□□ -1.6
MRE11P49959 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.03□□□□□ -1.6
MRE11P49959 RNU6-358P-201ENST00000516564 75 ntBASIC5.03□□□□□ -1.6
MRE11P49959 MRPL49P2-201ENST00000521066 465 ntBASIC5.03□□□□□ -1.6
MRE11P49959 ARL2BPP5-201ENST00000523141 481 ntBASIC5.03□□□□□ -1.6
MRE11P49959 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.03□□□□□ -1.6
MRE11P49959 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
MRE11P49959 RAB11AP2-201ENST00000545905 639 ntBASIC5.03□□□□□ -1.6
MRE11P49959 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.03□□□□□ -1.6
MRE11P49959 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.03□□□□□ -1.6
MRE11P49959 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.03□□□□□ -1.6
MRE11P49959 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.03□□□□□ -1.6
MRE11P49959 AC110743.1-201ENST00000584870 478 ntBASIC5.03□□□□□ -1.6
MRE11P49959 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.03□□□□□ -1.6
MRE11P49959 AL049634.3-201ENST00000604968 457 ntBASIC5.03□□□□□ -1.6
MRE11P49959 RNU4-89P-201ENST00000607443 133 ntBASIC5.03□□□□□ -1.6
MRE11P49959 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.03□□□□□ -1.6
MRE11P49959 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.03□□□□□ -1.6
MRE11P49959 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MRE11P49959 FARSBP1-201ENST00000435808 1778 ntBASIC5.03□□□□□ -1.6
MRE11P49959 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
MRE11P49959 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.03□□□□□ -1.6
MRE11P49959 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
MRE11P49959 AC027290.2-201ENST00000623210 18662 ntBASIC5.03□□□□□ -1.6
MRE11P49959 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
MRE11P49959 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
MRE11P49959 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
MRE11P49959 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
MRE11P49959 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
MRE11P49959 CPHL1P-201ENST00000461341 3407 ntBASIC5.02□□□□□ -1.61
MRE11P49959 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MRE11P49959 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MRE11P49959 CBX3P1-201ENST00000325243 554 ntBASIC5.02□□□□□ -1.61
MRE11P49959 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.02□□□□□ -1.61
MRE11P49959 RPL31P52-201ENST00000407532 367 ntBASIC5.02□□□□□ -1.61
MRE11P49959 RNU2-65P-201ENST00000410162 185 ntBASIC5.02□□□□□ -1.61
MRE11P49959 RNU4-55P-201ENST00000410731 137 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AMD1P2-201ENST00000412936 992 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC234782.4-201ENST00000417646 1048 ntBASIC5.02□□□□□ -1.61
MRE11P49959 BX295541.1-201ENST00000417774 250 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MRE11P49959 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.02□□□□□ -1.61
MRE11P49959 MTCYBP45-201ENST00000435243 565 ntBASIC5.02□□□□□ -1.61
MRE11P49959 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.02□□□□□ -1.61
MRE11P49959 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.02□□□□□ -1.61
MRE11P49959 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.02□□□□□ -1.61
MRE11P49959 RPL7P49-201ENST00000471402 708 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC091951.2-201ENST00000500762 203 ntBASIC5.02□□□□□ -1.61
MRE11P49959 MTCYBP18-201ENST00000501056 747 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC026412.2-201ENST00000512270 1075 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.02□□□□□ -1.61
MRE11P49959 RNU6-875P-201ENST00000516488 106 ntBASIC5.02□□□□□ -1.61
MRE11P49959 RN7SKP83-201ENST00000516512 178 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.02□□□□□ -1.61
MRE11P49959 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.02□□□□□ -1.61
MRE11P49959 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MRE11P49959 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.02□□□□□ -1.61
MRE11P49959 AL389895.1-201ENST00000554127 252 ntBASIC5.02□□□□□ -1.61
MRE11P49959 RPL21P5-201ENST00000554662 472 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC068831.4-201ENST00000556118 109 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC090515.3-201ENST00000560431 315 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AP001180.3-201ENST00000582221 145 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.02□□□□□ -1.61
MRE11P49959 BCRP9-201ENST00000605312 388 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC243654.2-201ENST00000612843 443 ntBASIC5.02□□□□□ -1.61
MRE11P49959 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.02□□□□□ -1.61
MRE11P49959 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.02□□□□□ -1.61
MRE11P49959 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MRE11P49959 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
MRE11P49959 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MRE11P49959 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.01□□□□□ -1.61
MRE11P49959 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.01□□□□□ -1.61
MRE11P49959 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
MRE11P49959 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MRE11P49959 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
MRE11P49959 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
MRE11P49959 OR11H4-201ENST00000315409 1082 ntBASIC5.01□□□□□ -1.61
MRE11P49959 RNU6-534P-201ENST00000364877 106 ntBASIC5.01□□□□□ -1.61
MRE11P49959 Y_RNA.573-201ENST00000384763 105 ntBASIC5.01□□□□□ -1.61
MRE11P49959 MIR491-201ENST00000384877 84 ntBASIC5.01□□□□□ -1.61
MRE11P49959 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.01□□□□□ -1.61
MRE11P49959 RNU6-628P-201ENST00000410675 107 ntBASIC5.01□□□□□ -1.61
MRE11P49959 RBMY1KP-201ENST00000423480 476 ntBASIC5.01□□□□□ -1.61
MRE11P49959 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
MRE11P49959 YME1L1P1-201ENST00000429435 297 ntBASIC5.01□□□□□ -1.61
MRE11P49959 SKP1P1-201ENST00000438081 489 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.01□□□□□ -1.61
MRE11P49959 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.01□□□□□ -1.61
MRE11P49959 Z82190.1-201ENST00000454534 490 ntBASIC5.01□□□□□ -1.61
MRE11P49959 MTND1P11-201ENST00000456661 876 ntBASIC5.01□□□□□ -1.61
MRE11P49959 OR6K1P-201ENST00000456766 971 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.01□□□□□ -1.61
MRE11P49959 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.01□□□□□ -1.61
MRE11P49959 RPL38P1-201ENST00000460914 211 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC069499.1-201ENST00000489433 509 ntBASIC5.01□□□□□ -1.61
MRE11P49959 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.01□□□□□ -1.61
MRE11P49959 OR5H5P-201ENST00000503164 928 ntBASIC5.01□□□□□ -1.61
MRE11P49959 KCTD9P5-201ENST00000504141 1170 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AP003467.2-201ENST00000520175 319 ntBASIC5.01□□□□□ -1.61
MRE11P49959 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms