Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 LEF1-218ENST00000512172 598 ntTSL 2 BASIC7.11□□□□□ -1.27
PRIM1P49642 SETP7-201ENST00000552169 453 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC7.11□□□□□ -1.27
PRIM1P49642 AC009779.6-201ENST00000603972 165 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.11□□□□□ -1.27
PRIM1P49642 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.11□□□□□ -1.27
PRIM1P49642 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.11□□□□□ -1.27
PRIM1P49642 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PRIM1P49642 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.11□□□□□ -1.27
PRIM1P49642 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PRIM1P49642 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.11□□□□□ -1.27
PRIM1P49642 PABPC1P7-201ENST00000413177 1513 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 AC074029.4-201ENST00000624796 1859 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PRIM1P49642 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PRIM1P49642 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PRIM1P49642 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
PRIM1P49642 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PRIM1P49642 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PRIM1P49642 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.1□□□□□ -1.27
PRIM1P49642 RNU6-770P-201ENST00000363929 105 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 SNORD82-201ENST00000365530 70 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 RNU2-15P-201ENST00000410692 191 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 RN7SKP126-201ENST00000411143 300 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC7.1□□□□□ -1.27
PRIM1P49642 MRPS18CP6-201ENST00000423587 223 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.1□□□□□ -1.27
PRIM1P49642 AL591704.1-201ENST00000432574 275 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AC092162.1-201ENST00000432828 434 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 FCF1P4-201ENST00000448326 183 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 RNU6-1218P-201ENST00000458990 108 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AC009127.1-201ENST00000467090 155 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AL136126.1-201ENST00000473603 402 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AC004980.4-201ENST00000513375 203 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 Y_RNA.673-201ENST00000516306 88 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 RNU4ATAC10P-201ENST00000516967 122 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AC136777.2-201ENST00000522979 358 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC7.1□□□□□ -1.27
PRIM1P49642 STX3-204ENST00000530221 534 ntTSL 5 BASIC7.1□□□□□ -1.27
PRIM1P49642 AL133271.1-201ENST00000538229 291 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC7.1□□□□□ -1.27
PRIM1P49642 AP005403.1-201ENST00000579720 229 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 MIR5188-201ENST00000583467 113 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC7.1□□□□□ -1.27
PRIM1P49642 AL022394.1-201ENST00000606979 292 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 AC023813.4-201ENST00000607580 580 ntBASIC7.1□□□□□ -1.27
PRIM1P49642 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PRIM1P49642 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.1□□□□□ -1.27
PRIM1P49642 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.1□□□□□ -1.27
PRIM1P49642 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PRIM1P49642 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.1□□□□□ -1.27
PRIM1P49642 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.1□□□□□ -1.27
PRIM1P49642 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PRIM1P49642 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
PRIM1P49642 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
PRIM1P49642 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 AC109446.4-201ENST00000623235 2755 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
PRIM1P49642 Y_RNA.416-201ENST00000384014 113 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 AL445189.1-201ENST00000405722 338 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 AC016397.1-201ENST00000412463 242 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 AC108032.1-201ENST00000416706 207 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 AL353691.1-201ENST00000451332 387 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 RN7SL591P-201ENST00000496150 292 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 RNU2-69P-201ENST00000516061 100 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 RNU6-111P-201ENST00000517179 105 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 RNA5SP373-201ENST00000517271 95 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 AP004607.2-201ENST00000533949 322 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 AC022080.3-201ENST00000544433 482 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC7.09□□□□□ -1.27
PRIM1P49642 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.09□□□□□ -1.27
PRIM1P49642 AL670379.4-201ENST00000605279 254 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC7.09□□□□□ -1.27
PRIM1P49642 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.09□□□□□ -1.27
PRIM1P49642 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 AC232271.1-201ENST00000602455 2715 ntBASIC7.09□□□□□ -1.27
PRIM1P49642 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.09□□□□□ -1.27
PRIM1P49642 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.09□□□□□ -1.27
PRIM1P49642 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PRIM1P49642 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC7.09□□□□□ -1.28
PRIM1P49642 AC009951.1-201ENST00000623674 2614 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 PANDAR-201ENST00000629595 1506 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 Y_RNA.291-201ENST00000364886 113 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 RNU6-306P-201ENST00000384617 107 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 RN7SKP17-201ENST00000411242 351 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 RPS3AP12-201ENST00000443616 753 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 RPS17P13-201ENST00000448974 407 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms