Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CR1P49238 AL159987.2-201ENST00000432754 307 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CR1P49238 AC108734.1-201ENST00000439549 399 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 RAC1P7-201ENST00000445367 377 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CR1P49238 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CR1P49238 ELOCP23-201ENST00000452014 332 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AC244505.3-201ENST00000454598 187 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CR1P49238 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CR1P49238 AC104629.1-201ENST00000494226 508 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.74□□□□□ -1.97
CX3CR1P49238 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CR1P49238 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CR1P49238 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CR1P49238 MIR3158-1-201ENST00000583596 81 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.74□□□□□ -1.97
CX3CR1P49238 AL583856.2-201ENST00000606298 543 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 CYCSP41-201ENST00000616920 296 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AC006133.1-201ENST00000617106 264 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 AP003122.6-201ENST00000623831 495 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 U6.101-201ENST00000637707 76 ntBASIC2.74□□□□□ -1.97
CX3CR1P49238 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CR1P49238 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CR1P49238 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CR1P49238 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CR1P49238 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CX3CR1P49238 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CX3CR1P49238 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CX3CR1P49238 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CX3CR1P49238 RNU6-1176P-201ENST00000390955 107 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 RNU6-882P-201ENST00000391025 103 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AC110754.1-201ENST00000399740 601 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CX3CR1P49238 AL357075.1-201ENST00000404107 726 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 TMEM167AP1-201ENST00000423409 219 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AC093151.1-201ENST00000427711 313 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AC097713.2-201ENST00000430199 356 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AL353705.1-201ENST00000433468 480 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 RPS12P18-201ENST00000442381 270 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 GAPDHP27-201ENST00000447427 1020 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 USP9YP34-201ENST00000453983 808 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 OR4G11P-201ENST00000492842 939 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 COX7A2P2-201ENST00000505291 250 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AC010460.2-201ENST00000509054 677 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CR1P49238 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CR1P49238 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CR1P49238 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.73□□□□□ -1.97
CX3CR1P49238 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.73□□□□□ -1.97
CX3CR1P49238 OR10V3P-201ENST00000525712 725 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CX3CR1P49238 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.73□□□□□ -1.97
CX3CR1P49238 SETP7-201ENST00000552169 453 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CX3CR1P49238 DNAJC8P1-201ENST00000554535 372 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.73□□□□□ -1.97
CX3CR1P49238 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.73□□□□□ -1.97
CX3CR1P49238 RN7SL339P-201ENST00000580597 296 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.73□□□□□ -1.97
CX3CR1P49238 AL031985.2-201ENST00000600955 480 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 MTATP6P2-201ENST00000603319 678 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AC099785.1-201ENST00000605697 437 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AC019176.2-201ENST00000611579 315 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.73□□□□□ -1.97
CX3CR1P49238 AC087821.2-201ENST00000637086 450 ntBASIC2.73□□□□□ -1.97
CX3CR1P49238 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
CX3CR1P49238 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.73□□□□□ -1.97
CX3CR1P49238 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.73□□□□□ -1.97
CX3CR1P49238 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CX3CR1P49238 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CR1P49238 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 MIR449B-201ENST00000384995 97 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CX3CR1P49238 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.72□□□□□ -1.97
CX3CR1P49238 AC069282.1-201ENST00000411911 526 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 BTF3P8-201ENST00000414577 526 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 MUPP-201ENST00000438111 566 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.72□□□□□ -1.97
CX3CR1P49238 SNORA84-201ENST00000459229 133 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC034236.1-201ENST00000469891 373 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.72□□□□□ -1.97
CX3CR1P49238 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CR1P49238 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.72□□□□□ -1.97
CX3CR1P49238 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 RN7SKP43-201ENST00000516173 320 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 SNORA67.7-201ENST00000516664 135 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 DUXAP2-201ENST00000519198 589 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC024224.1-201ENST00000538284 609 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 CR383656.7-201ENST00000548164 174 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 FAM35CP-201ENST00000554755 2470 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms