Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.44□□□□□ -1.7
TM4SF4P48230 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TM4SF4P48230 AC092125.1-201ENST00000562568 1995 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AC058791.1-201ENST00000608412 3198 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TM4SF4P48230 Y_RNA.97-201ENST00000363094 102 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 U3.4-201ENST00000363352 213 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 RNU4-91P-201ENST00000364778 135 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 RNA5SP189-201ENST00000364920 115 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.44□□□□□ -1.7
TM4SF4P48230 RN7SKP142-201ENST00000411236 328 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 BEND7P1-201ENST00000422058 457 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 NANOGP6-201ENST00000429190 847 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.44□□□□□ -1.7
TM4SF4P48230 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.44□□□□□ -1.7
TM4SF4P48230 AC078817.1-201ENST00000492623 435 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AC112204.1-201ENST00000502591 103 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.44□□□□□ -1.7
TM4SF4P48230 RNU6-1095P-201ENST00000516148 108 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 HMGN1P28-201ENST00000521340 364 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TM4SF4P48230 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TM4SF4P48230 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.44□□□□□ -1.7
TM4SF4P48230 NCAPGP2-201ENST00000557911 754 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AC034268.2-201ENST00000571784 482 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.44□□□□□ -1.7
TM4SF4P48230 AC010591.1-201ENST00000603941 649 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AL139286.1-201ENST00000604465 483 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AL359999.1-201ENST00000604513 294 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TM4SF4P48230 AC064801.1-201ENST00000612025 407 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.44□□□□□ -1.7
TM4SF4P48230 MIR8058-201ENST00000615737 89 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 AC002550.2-201ENST00000621246 394 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.44□□□□□ -1.7
TM4SF4P48230 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TM4SF4P48230 AC021755.1-201ENST00000559747 1447 ntBASIC4.44□□□□□ -1.7
TM4SF4P48230 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TM4SF4P48230 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.44□□□□□ -1.7
TM4SF4P48230 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
TM4SF4P48230 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM4SF4P48230 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM4SF4P48230 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM4SF4P48230 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TM4SF4P48230 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.43□□□□□ -1.7
TM4SF4P48230 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM4SF4P48230 RNU4-21P-201ENST00000362802 126 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 RNU6-1078P-201ENST00000364522 103 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 RNU6-1074P-201ENST00000383995 104 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 RNU6-533P-201ENST00000384144 107 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 MIR199A2-201ENST00000385289 110 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 RPL7P60-201ENST00000397636 735 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 RPL23AP48-201ENST00000406913 488 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.43□□□□□ -1.7
TM4SF4P48230 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.43□□□□□ -1.7
TM4SF4P48230 CYCSP46-201ENST00000423569 204 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.43□□□□□ -1.7
TM4SF4P48230 AC096638.2-201ENST00000434965 711 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.43□□□□□ -1.7
TM4SF4P48230 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM4SF4P48230 EPS15P1-201ENST00000448836 336 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AC008155.2-201ENST00000464337 397 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 MTND4LP3-201ENST00000468320 276 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.43□□□□□ -1.7
TM4SF4P48230 MLLT10P2-201ENST00000506434 249 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.43□□□□□ -1.7
TM4SF4P48230 SNORA31.20-201ENST00000517111 133 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AP004242.1-201ENST00000533701 349 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AP000873.5-201ENST00000533906 236 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.43□□□□□ -1.7
TM4SF4P48230 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.43□□□□□ -1.7
TM4SF4P48230 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
TM4SF4P48230 AC069240.1-201ENST00000548774 375 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 MIR4472-2-201ENST00000582069 67 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.43□□□□□ -1.7
TM4SF4P48230 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
TM4SF4P48230 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.43□□□□□ -1.7
TM4SF4P48230 XIAPP1-201ENST00000603162 600 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AC012669.1-201ENST00000603209 283 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AC027807.2-201ENST00000616099 408 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 AL355365.1-201ENST00000616480 294 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.43□□□□□ -1.7
TM4SF4P48230 AL035425.3-201ENST00000564206 4996 ntBASIC4.43□□□□□ -1.7
TM4SF4P48230 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.43□□□□□ -1.7
TM4SF4P48230 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM4SF4P48230 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TM4SF4P48230 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
TM4SF4P48230 AP001350.1-201ENST00000601906 1524 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
TM4SF4P48230 AL022393.1-201ENST00000625142 1677 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 AC011460.1-201ENST00000636268 1834 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.42□□□□□ -1.7
TM4SF4P48230 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 FRG1BP-201ENST00000278882 761 ntBASIC4.42□□□□□ -1.7
TM4SF4P48230 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
TM4SF4P48230 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.42□□□□□ -1.7
TM4SF4P48230 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TM4SF4P48230 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms