Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNFP41002 ELOCP18-201ENST00000434209 337 ntBASIC5.08□□□□□ -1.6
CCNFP41002 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNFP41002 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNFP41002 PRPS1P1-201ENST00000445305 876 ntBASIC5.08□□□□□ -1.6
CCNFP41002 AC016696.1-201ENST00000446949 318 ntBASIC5.08□□□□□ -1.6
CCNFP41002 RPL7L1P1-201ENST00000448259 785 ntBASIC5.08□□□□□ -1.6
CCNFP41002 AC234775.1-201ENST00000454247 670 ntBASIC5.08□□□□□ -1.6
CCNFP41002 RPL36AP13-201ENST00000457490 317 ntBASIC5.08□□□□□ -1.6
CCNFP41002 RPS4XP1-201ENST00000482189 787 ntBASIC5.08□□□□□ -1.6
CCNFP41002 RN7SL629P-201ENST00000489622 285 ntBASIC5.08□□□□□ -1.6
CCNFP41002 FAM206BP-201ENST00000510179 541 ntBASIC5.08□□□□□ -1.6
CCNFP41002 RNU6-1170P-201ENST00000515974 106 ntBASIC5.08□□□□□ -1.6
CCNFP41002 RNU6-1045P-201ENST00000516321 107 ntBASIC5.08□□□□□ -1.6
CCNFP41002 HMGN1P28-201ENST00000521340 364 ntBASIC5.08□□□□□ -1.6
CCNFP41002 MTND4P7-201ENST00000523876 130 ntBASIC5.08□□□□□ -1.6
CCNFP41002 AP003385.6-201ENST00000531603 374 ntBASIC5.08□□□□□ -1.6
CCNFP41002 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.08□□□□□ -1.6
CCNFP41002 AC005868.1-201ENST00000536421 331 ntBASIC5.08□□□□□ -1.6
CCNFP41002 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNFP41002 SETP7-201ENST00000552169 453 ntBASIC5.08□□□□□ -1.6
CCNFP41002 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNFP41002 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNFP41002 AL031176.1-201ENST00000604554 466 ntBASIC5.08□□□□□ -1.6
CCNFP41002 CTHRC1P1-201ENST00000605383 469 ntBASIC5.08□□□□□ -1.6
CCNFP41002 AC126915.2-201ENST00000610957 190 ntBASIC5.08□□□□□ -1.6
CCNFP41002 RPSAP73-201ENST00000614820 330 ntBASIC5.08□□□□□ -1.6
CCNFP41002 AC084781.2-201ENST00000615568 161 ntBASIC5.08□□□□□ -1.6
CCNFP41002 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNFP41002 MTND4LP32-201ENST00000636111 270 ntBASIC5.08□□□□□ -1.6
CCNFP41002 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CCNFP41002 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
CCNFP41002 PABPC1P6-201ENST00000445594 1829 ntBASIC5.08□□□□□ -1.6
CCNFP41002 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCNFP41002 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.08□□□□□ -1.6
CCNFP41002 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCNFP41002 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCNFP41002 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.08□□□□□ -1.6
CCNFP41002 MTCO1P24-201ENST00000515438 1558 ntBASIC5.08□□□□□ -1.6
CCNFP41002 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.08□□□□□ -1.6
CCNFP41002 DHX9P1-201ENST00000436565 3076 ntBASIC5.08□□□□□ -1.6
CCNFP41002 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CCNFP41002 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCNFP41002 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCNFP41002 AP001273.1-201ENST00000624493 3152 ntBASIC5.07□□□□□ -1.6
CCNFP41002 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCNFP41002 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNFP41002 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNFP41002 RNU6-1287P-201ENST00000362914 107 ntBASIC5.07□□□□□ -1.6
CCNFP41002 RNU6-1252P-201ENST00000363054 104 ntBASIC5.07□□□□□ -1.6
CCNFP41002 Y_RNA.315-201ENST00000365117 102 ntBASIC5.07□□□□□ -1.6
CCNFP41002 RNU6-1060P-201ENST00000384664 107 ntBASIC5.07□□□□□ -1.6
CCNFP41002 RNU6-821P-201ENST00000390995 107 ntBASIC5.07□□□□□ -1.6
CCNFP41002 MIR1182-201ENST00000408363 97 ntBASIC5.07□□□□□ -1.6
CCNFP41002 RNA5SP56-201ENST00000410277 118 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNFP41002 UBE2FP1-201ENST00000416536 447 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AL391219.1-201ENST00000422570 483 ntBASIC5.07□□□□□ -1.6
CCNFP41002 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.07□□□□□ -1.6
CCNFP41002 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNFP41002 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNFP41002 RPL35AP22-201ENST00000436855 335 ntBASIC5.07□□□□□ -1.6
CCNFP41002 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNFP41002 RPL29P29-201ENST00000448725 423 ntBASIC5.07□□□□□ -1.6
CCNFP41002 RPS17P2-201ENST00000461663 408 ntBASIC5.07□□□□□ -1.6
CCNFP41002 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNFP41002 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNFP41002 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNFP41002 RNA5SP92-201ENST00000516437 110 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNFP41002 DEFB109D-201ENST00000529497 240 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNFP41002 AC020661.2-201ENST00000560114 134 ntBASIC5.07□□□□□ -1.6
CCNFP41002 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCNFP41002 HNRNPCP4-201ENST00000571636 900 ntBASIC5.07□□□□□ -1.6
CCNFP41002 MIR5583-1-201ENST00000580941 59 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AL022099.1-201ENST00000604551 712 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AC092807.2-201ENST00000609367 243 ntBASIC5.07□□□□□ -1.6
CCNFP41002 MIR8069-1-201ENST00000616627 86 ntBASIC5.07□□□□□ -1.6
CCNFP41002 MIR8069-2-201ENST00000621412 86 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AC011155.2-201ENST00000623202 216 ntBASIC5.07□□□□□ -1.6
CCNFP41002 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNFP41002 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNFP41002 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
CCNFP41002 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCNFP41002 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNFP41002 AC027287.1-201ENST00000553115 1453 ntBASIC5.07□□□□□ -1.6
CCNFP41002 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNFP41002 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCNFP41002 Z95331.1-201ENST00000623075 23112 ntBASIC5.06□□□□□ -1.6
CCNFP41002 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCNFP41002 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNFP41002 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNFP41002 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNFP41002 MIR369-201ENST00000362155 70 ntBASIC5.06□□□□□ -1.6
CCNFP41002 RNU6-522P-201ENST00000364497 107 ntBASIC5.06□□□□□ -1.6
CCNFP41002 RNU1-43P-201ENST00000365052 165 ntBASIC5.06□□□□□ -1.6
CCNFP41002 Y_RNA.378-201ENST00000365652 113 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms