Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MIR199A2-201ENST00000385289 110 ntBASIC3.7□□□□□ -1.82
RPL3P39023 HMGN2P8-201ENST00000391458 268 ntBASIC3.7□□□□□ -1.82
RPL3P39023 RPL7P25-201ENST00000404151 721 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 HMGB3P23-201ENST00000414981 585 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.7□□□□□ -1.82
RPL3P39023 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 TPT1P13-201ENST00000449760 499 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AL162388.1-201ENST00000450912 352 ntBASIC3.7□□□□□ -1.82
RPL3P39023 HMGB1P15-201ENST00000453854 435 ntBASIC3.7□□□□□ -1.82
RPL3P39023 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 AC112204.1-201ENST00000502591 103 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.7□□□□□ -1.82
RPL3P39023 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 RN7SKP298-201ENST00000515950 94 ntBASIC3.7□□□□□ -1.82
RPL3P39023 RNU6-27P-201ENST00000516146 107 ntBASIC3.7□□□□□ -1.82
RPL3P39023 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
RPL3P39023 RNU6-714P-201ENST00000516963 103 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.7□□□□□ -1.82
RPL3P39023 SUMO2P20-201ENST00000520803 283 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.7□□□□□ -1.82
RPL3P39023 RPL21P5-201ENST00000554662 472 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.7□□□□□ -1.82
RPL3P39023 AC090877.1-201ENST00000561418 344 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.7□□□□□ -1.82
RPL3P39023 UBE2L4-201ENST00000587688 464 ntBASIC3.7□□□□□ -1.82
RPL3P39023 HMGN1P30-201ENST00000589286 268 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC008745.1-201ENST00000604064 271 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AL009028.1-201ENST00000604895 802 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC090578.1-201ENST00000604955 591 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC091167.4-201ENST00000605079 184 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 AC091834.1-201ENST00000614543 472 ntBASIC3.7□□□□□ -1.82
RPL3P39023 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AP001506.1-201ENST00000615444 211 ntBASIC3.7□□□□□ -1.82
RPL3P39023 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPL3P39023 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 AL158801.5-201ENST00000623123 465 ntBASIC3.7□□□□□ -1.82
RPL3P39023 MIR4496-201ENST00000635896 61 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC068137.3-201ENST00000639191 341 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC073869.6-201ENST00000640656 341 ntBASIC3.7□□□□□ -1.82
RPL3P39023 AC092447.10-201ENST00000620607 1652 ntBASIC3.7□□□□□ -1.82
RPL3P39023 MTND5P26-201ENST00000426018 1752 ntBASIC3.7□□□□□ -1.82
RPL3P39023 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
RPL3P39023 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL3P39023 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RPL3P39023 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPL3P39023 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPL3P39023 PABPC1P7-201ENST00000413177 1513 ntBASIC3.7□□□□□ -1.82
RPL3P39023 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
RPL3P39023 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.7□□□□□ -1.82
RPL3P39023 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RPL3P39023 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL3P39023 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL3P39023 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL3P39023 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPL3P39023 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
RPL3P39023 RNVU1-3-201ENST00000364313 161 ntBASIC3.69□□□□□ -1.82
RPL3P39023 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RPL3P39023 RNU6-1207P-201ENST00000384343 107 ntBASIC3.69□□□□□ -1.82
RPL3P39023 Y_RNA.582-201ENST00000391023 95 ntBASIC3.69□□□□□ -1.82
RPL3P39023 RPS26P8-201ENST00000393490 348 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AL356421.1-201ENST00000403255 413 ntBASIC3.69□□□□□ -1.82
RPL3P39023 RNU2-15P-201ENST00000410692 191 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AC078974.1-201ENST00000411597 223 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.69□□□□□ -1.82
RPL3P39023 PSMA2P3-201ENST00000429685 675 ntBASIC3.69□□□□□ -1.82
RPL3P39023 C8orf59P1-201ENST00000429930 303 ntBASIC3.69□□□□□ -1.82
RPL3P39023 RPL7P28-201ENST00000437739 740 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.69□□□□□ -1.82
RPL3P39023 RPL7P52-201ENST00000449200 742 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL3P39023 GAPDHP17-201ENST00000449858 1001 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AL353691.1-201ENST00000451332 387 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL3P39023 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.69□□□□□ -1.82
RPL3P39023 snoU109.1-201ENST00000459339 135 ntBASIC3.69□□□□□ -1.82
RPL3P39023 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RPL3P39023 AC034222.1-201ENST00000494052 532 ntBASIC3.69□□□□□ -1.82
RPL3P39023 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.69□□□□□ -1.82
RPL3P39023 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL3P39023 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL3P39023 TMEM248P1-201ENST00000510579 951 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.69□□□□□ -1.82
RPL3P39023 SNORA18.6-201ENST00000516792 115 ntBASIC3.69□□□□□ -1.82
RPL3P39023 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
RPL3P39023 RAB9BP1-201ENST00000519581 626 ntBASIC3.69□□□□□ -1.82
RPL3P39023 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms