Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC006065.5-201ENST00000623427 349 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.99□□□□□ -1.93
BRCA1P38398 PABPC1P7-201ENST00000413177 1513 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 AC069528.2-201ENST00000624849 1991 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 MTND5P3-201ENST00000438536 1800 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
BRCA1P38398 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BRCA1P38398 AL355379.1-201ENST00000405542 640 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 AIMP1P1-201ENST00000418670 937 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 AC012498.1-201ENST00000424037 437 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 MORF4L1P7-201ENST00000426038 703 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 AC093278.1-201ENST00000494700 600 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 RNF138P1-201ENST00000502765 546 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.99□□□□□ -1.93
BRCA1P38398 MTCO1P30-201ENST00000515244 580 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.99□□□□□ -1.93
BRCA1P38398 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.99□□□□□ -1.93
BRCA1P38398 NOP56P3-201ENST00000549457 385 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 OR4H6P-202ENST00000603819 340 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 AC021851.1-201ENST00000608537 1082 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 AL590396.2-201ENST00000636511 1041 ntBASIC2.99□□□□□ -1.93
BRCA1P38398 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.98□□□□□ -1.93
BRCA1P38398 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
BRCA1P38398 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA1P38398 SEC63P2-201ENST00000503863 1939 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA1P38398 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA1P38398 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA1P38398 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA1P38398 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BRCA1P38398 U8.13-201ENST00000390842 128 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 RN7SKP140-201ENST00000411196 284 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.98□□□□□ -1.93
BRCA1P38398 AL451074.5-201ENST00000415894 435 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.98□□□□□ -1.93
BRCA1P38398 Z98742.2-201ENST00000431564 187 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.98□□□□□ -1.93
BRCA1P38398 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
BRCA1P38398 RPL7P52-201ENST00000449200 742 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.98□□□□□ -1.93
BRCA1P38398 TRBV1-201ENST00000476502 284 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.98□□□□□ -1.93
BRCA1P38398 AC103833.1-201ENST00000517442 172 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 HIGD1AP10-201ENST00000527837 282 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 AC124293.1-201ENST00000530034 493 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.98□□□□□ -1.93
BRCA1P38398 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.98□□□□□ -1.93
BRCA1P38398 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.98□□□□□ -1.93
BRCA1P38398 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.98□□□□□ -1.93
BRCA1P38398 AL355812.1-201ENST00000603215 216 ntBASIC2.98□□□□□ -1.93
BRCA1P38398 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
BRCA1P38398 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
BRCA1P38398 RNU6-1159P-201ENST00000362933 107 ntBASIC2.97□□□□□ -1.93
BRCA1P38398 SNORA80E-201ENST00000384744 137 ntBASIC2.97□□□□□ -1.93
BRCA1P38398 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.97□□□□□ -1.93
BRCA1P38398 RN7SKP282-201ENST00000516824 299 ntBASIC2.97□□□□□ -1.93
BRCA1P38398 AC093331.1-201ENST00000521474 169 ntBASIC2.97□□□□□ -1.93
BRCA1P38398 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.97□□□□□ -1.93
BRCA1P38398 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.97□□□□□ -1.93
BRCA1P38398 MIR6873-201ENST00000622788 63 ntBASIC2.97□□□□□ -1.93
BRCA1P38398 AP003400.6-201ENST00000624698 740 ntBASIC2.97□□□□□ -1.93
BRCA1P38398 AC017104.5-201ENST00000637647 639 ntBASIC2.97□□□□□ -1.93
BRCA1P38398 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
BRCA1P38398 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.97□□□□□ -1.93
BRCA1P38398 Y_RNA.140-201ENST00000363474 103 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.96□□□□□ -1.93
BRCA1P38398 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
BRCA1P38398 AL512633.1-201ENST00000399931 655 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.96□□□□□ -1.93
BRCA1P38398 TATDN1P1-201ENST00000414123 891 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 USP9YP20-201ENST00000419224 558 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 PSMA2P3-201ENST00000429685 675 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.96□□□□□ -1.93
BRCA1P38398 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.96□□□□□ -1.93
BRCA1P38398 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.96□□□□□ -1.93
BRCA1P38398 AC078918.1-201ENST00000498515 228 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.96□□□□□ -1.93
BRCA1P38398 RNA5SP468-201ENST00000516782 93 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 AL389895.1-201ENST00000554127 252 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.93
BRCA1P38398 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.96□□□□□ -1.93
BRCA1P38398 AP001521.1-201ENST00000609150 300 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
BRCA1P38398 U73479.1-201ENST00000618062 168 ntBASIC2.96□□□□□ -1.93
BRCA1P38398 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.96□□□□□ -1.93
BRCA1P38398 AC022336.2-201ENST00000568966 2538 ntBASIC2.96□□□□□ -1.94
BRCA1P38398 MTCO1P18-201ENST00000455518 1419 ntBASIC2.96□□□□□ -1.94
BRCA1P38398 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
BRCA1P38398 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.96□□□□□ -1.94
BRCA1P38398 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.96□□□□□ -1.94
BRCA1P38398 RNU6-1151P-201ENST00000384684 107 ntBASIC2.96□□□□□ -1.94
BRCA1P38398 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.96□□□□□ -1.94
BRCA1P38398 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.96□□□□□ -1.94
BRCA1P38398 AC007390.1-201ENST00000415722 356 ntBASIC2.96□□□□□ -1.94
BRCA1P38398 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.96□□□□□ -1.94
BRCA1P38398 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
BRCA1P38398 CFTRP1-201ENST00000456646 183 ntBASIC2.96□□□□□ -1.94
BRCA1P38398 MTCO2P32-201ENST00000514865 403 ntBASIC2.96□□□□□ -1.94
BRCA1P38398 RNA5SP309-201ENST00000516670 106 ntBASIC2.96□□□□□ -1.94
BRCA1P38398 AC109635.4-202ENST00000531666 412 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms